Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447950
Identifier: 126447950
GI number: 126447950
Start: 2122581
End: 2124080
Strand: Direct
Name: 126447950
Synonym: BMA10247_A2184
Alternate gene names: NA
Gene position: 2122581-2124080 (Clockwise)
Preceding gene: 126445708
Following gene: 126446315
Centisome position: 90.22
GC content: 64.87
Gene sequence:
>1500_bases ATGAAGAAACAGCAAGCCCAGACGGCCGCCGCCGGCGTCCAGCCGCAAGCGGATTCGGATTTCGCGCAGTTGCTCGCGCA GGAGTTCAAGCCGAAGACGGAGCAGGCGCGCGAAGCGGTCGAATACGCGGTGCGCACGCTCGCCGAGCAGGCGCTCGCGC AATCGGCGACGATCAGCGACGATGCATACAAGAGCATCGCCGCGATCATCGCGCAGATCGACCATAAGCTATCCGAACAG ATCAACCTGATCCTCCATCACGCGGATTTCCAGAAGCTCGAATCGGCGTGGCGCGGGCTGCATCACCTGGTGTCGAACAC CGAGACCGACGAGCGCCTGAAGATCCGCTTCATGGACATCTCGAAGGAAGAGCTGCGCCGCACGATGCGGCGCTACAAGG GGCAATCGTGGGACCAGAGCCCGCTCTTCAAGCAGATCTACGAGGAGGAGTACGGGCAGCTCGGCGGCGAGCCGTACGGC TGCCTCGTCGCCGATTACTACTTCGACCACACGCCGCCCGACGTCGACCTGCTCGGCTCGATCTCGAAGGTGGCCGCGTC CGCGCACACGCCGTTCCTCTCCGGCGCGTCGCCTTCGGTGCTGCAGATGGAATCGTGGCAGGAGCTCGCGAACCCGCGCG ACCTGACGAAGATCTTCACGCAAAACCTCGAATACGCGTCATGGAACGCGCTGCGCAACATGGACGACGCGCGCTACATC GGCCTCGCGATGCCGCGCTTCCTGTCGCGCCTGCCGTACGGCGTGCTGACGAATCCCGTCGACGAGTTCGACTTCGAGGA AGACACGAACGGCGCCGACCATCGCCGCTATGCGTGGACGAACGCCGCCTACGCGATGGGCGTGAACATCAACCGGTCGT TCCGGCTCTACGGCTGGTGCTCGCTCATTCGCGGCGTCGAATCGGGCGGCACGGTCGAGAACCTGCCGTGCCATACGTTC CCGACCGACGACGGCGGCATCGACATCAAATGCCCAACCGAGATCGCGATCTCGGACCGGCGCGAGGCGGAGCTGTCGAA GAACGGCTTCATTCCGCTCGTGCACCGCAAGAACACCGATCACGCGACGTTCATCGGCGCGCAATCGCTGCACAAGCCGG CCGAATACGACGATTCCGACGCGACGGCCAACGCGAACCTGTCGGCGCGCCTGCCGTATCTGTTCGCATGCTCGCGCTTC GCGCACTACCTGAAGTGCATCGTGCGCGACAAGGTGGGCGCCTTCAAGGAGCGCGAGGACATGCAGCGCTGGCTGAACGA ATGGATCATGAACTACGTCGACGCGGACCCGGCGAACTCGTCGCAGGACACGAAGGCGCGCCGGCCGCTCGCGGCCGCCG AGGTGGTCGTCGAGCAGGCGCAGGGCAACCCCGGCTACTACCAGGCGAAGTTCTTCCTGCGGCCGCATTTCCAGCTCGAG GGCCTGACCGTGTCGCTGCGGCTCGTCGCGAAGCTGCCGTCGATCAAGGAAGCCGCCTGA
Upstream 100 bases:
>100_bases GCGGGCAATGCGCGCGGCGCGAAGGACGCGCCCGACACGGCGAACCACGACAGCGATGCGGCCTGAGCGGCCGCCCTACA CCATACCGGGGAAACGAACC
Downstream 100 bases:
>100_bases CGCATCGCCGGGCGGGCGTCCCCGGTCGGCCGGCTTCGCGCCTTCGCCCACGCGCGCGACGCCGCGCGGCGCCGGCTGTT TTGTCATCCACGCAATCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKKQQAQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFLSGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA
Sequences:
>Translated_499_residues MKKQQAQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFLSGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA >Mature_499_residues MKKQQAQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFLSGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56313; Mature: 56313
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQQAQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISD CCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DAYKSIAAIIAQIDHKLSEQINLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYGCLVADYYFDHTPPDVDLLGS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH ISKVAASAHTPFLSGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI HHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWC HHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHH SLIRGVESGGTVENLPCHTFPTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTD HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCC HATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRFAHYLKCIVRDKVGAFKERED CCEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE HHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVAKLPSIKEAA CEEEEEHHHHHCCCHHCCC >Mature Secondary Structure MKKQQAQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISD CCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DAYKSIAAIIAQIDHKLSEQINLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYGCLVADYYFDHTPPDVDLLGS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH ISKVAASAHTPFLSGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI HHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWC HHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHH SLIRGVESGGTVENLPCHTFPTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTD HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCC HATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRFAHYLKCIVRDKVGAFKERED CCEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE HHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVAKLPSIKEAA CEEEEEHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA