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The map label for this gene is 126445708

Identifier: 126445708

GI number: 126445708

Start: 2121965

End: 2122546

Strand: Direct

Name: 126445708

Synonym: BMA10247_A2183

Alternate gene names: NA

Gene position: 2121965-2122546 (Clockwise)

Preceding gene: 126447303

Following gene: 126447950

Centisome position: 90.19

GC content: 67.35

Gene sequence:

>582_bases
ATGTCCGCATCCAGCAGCTCTCAAAAATTCATCGCGCGCAACCGCGCGCCCCGCGTGCAGATCGAATACGACGTCGAAGT
CTACGGCTCGGAAAAGAAGGTCGAACTGCCGTTCGTGATGGGCGTGCTCGCCGACCTGTCGGGCAAGCCGGTCGCGCCGC
TGCCCGCCGTCGCCGACCGGCGCTTCCTCGACATCGACATCGACAACTTCGACGAGCGGATGAAGGCGATCAAGCCGCGC
GTGGCGTTCGCGGTGGACAACACGCTGTCGGGCGACGGGCAGCTGATGGTCGACATGACGTTCGAAAGCATCGAGGACTT
CTCGCCCGCCGCGATCGCGCGAATGGTCGGCCCGTTACGGCAATTGCTCGAGGCGCGCACGCAGCTCGCGAACCTGCAGA
CCTACATGGACGACAAATCGGGCGCCGAGACGCTCGTCAACCAGTTGCTGCAGGACCCGGCGCTGCTGCGCTCGCTCGCG
GCCGCGCCGAAGCCGCAGCTCGCTGGCGGGCCGGACGCGGGCAATGCGCGCGGCGCGAAGGACGCGCCCGACACGGCGAA
CCACGACAGCGATGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCCCGGCCAAGCAAGCCGGGCGGGGCCGCCGAACGCGCCGCTCACCGCCGTGCAGGCCGGCTAGCCCTGCTGTCTTTCC
CTTCACTCACGGAGTCCCGC

Downstream 100 bases:

>100_bases
GCGGCCGCCCTACACCATACCGGGGAAACGAACCATGAAGAAACAGCAAGCCCAGACGGCCGCCGCCGGCGTCCAGCCGC
AAGCGGATTCGGATTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSASSSSQKFIARNRAPRVQIEYDVEVYGSEKKVELPFVMGVLADLSGKPVAPLPAVADRRFLDIDIDNFDERMKAIKPR
VAFAVDNTLSGDGQLMVDMTFESIEDFSPAAIARMVGPLRQLLEARTQLANLQTYMDDKSGAETLVNQLLQDPALLRSLA
AAPKPQLAGGPDAGNARGAKDAPDTANHDSDAA

Sequences:

>Translated_193_residues
MSASSSSQKFIARNRAPRVQIEYDVEVYGSEKKVELPFVMGVLADLSGKPVAPLPAVADRRFLDIDIDNFDERMKAIKPR
VAFAVDNTLSGDGQLMVDMTFESIEDFSPAAIARMVGPLRQLLEARTQLANLQTYMDDKSGAETLVNQLLQDPALLRSLA
AAPKPQLAGGPDAGNARGAKDAPDTANHDSDAA
>Mature_192_residues
SASSSSQKFIARNRAPRVQIEYDVEVYGSEKKVELPFVMGVLADLSGKPVAPLPAVADRRFLDIDIDNFDERMKAIKPRV
AFAVDNTLSGDGQLMVDMTFESIEDFSPAAIARMVGPLRQLLEARTQLANLQTYMDDKSGAETLVNQLLQDPALLRSLAA
APKPQLAGGPDAGNARGAKDAPDTANHDSDAA

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20772; Mature: 20641

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSSSQKFIARNRAPRVQIEYDVEVYGSEKKVELPFVMGVLADLSGKPVAPLPAVADR
CCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC
RFLDIDIDNFDERMKAIKPRVAFAVDNTLSGDGQLMVDMTFESIEDFSPAAIARMVGPLR
EEEEECCCCHHHHHHHHCCHHEEEECCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHH
QLLEARTQLANLQTYMDDKSGAETLVNQLLQDPALLRSLAAAPKPQLAGGPDAGNARGAK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DAPDTANHDSDAA
CCCCCCCCCCCCC
>Mature Secondary Structure 
SASSSSQKFIARNRAPRVQIEYDVEVYGSEKKVELPFVMGVLADLSGKPVAPLPAVADR
CCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCC
RFLDIDIDNFDERMKAIKPRVAFAVDNTLSGDGQLMVDMTFESIEDFSPAAIARMVGPLR
EEEEECCCCHHHHHHHHCCHHEEEECCCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHH
QLLEARTQLANLQTYMDDKSGAETLVNQLLQDPALLRSLAAAPKPQLAGGPDAGNARGAK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DAPDTANHDSDAA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA