| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447698
Identifier: 126447698
GI number: 126447698
Start: 866953
End: 867501
Strand: Reverse
Name: 126447698
Synonym: BMA10247_A0914
Alternate gene names: NA
Gene position: 867501-866953 (Counterclockwise)
Preceding gene: 262192882
Following gene: 126447200
Centisome position: 36.87
GC content: 63.75
Gene sequence:
>549_bases TTGCGTTCTTCCTTTGTCCGCAGCGGTGTCGCGTTGGCGGCCGCGTGCGCTGCGCTGTCGGCGACGGCGGCCGAATACCC GATCGGCAAGCATCAGATTCAAGGCGGGATGGAGATCGGCGCGGTGTATCTGCAGCCGATCACGATGGACCCGGAAGGGA TGATGCGCAAGGCGTCGGATTCGGACATCCACCTCGAGGCCGATATCCATGCGGTCAAGAACAACCCGACGGGTTTCGCC GAAGGCGACTGGATGCCGTATCTGCAAGTCACGTACAAGCTGACCAAGCAGGGCGACGCGAAGTGGGCGGCGCAGGGCGA TCTGATGGGCATGGTCGCGAGCGACGGTCCGCACTACGGCGACAACGTGAAGCTCAACGGCCCGGGCAAGTATCACCTGA CGCTCGTCGTGAAGCCGCCGATGCAGACGGGCCACATGGCGTTCGGCCGCCACGTCGACAAGGAAACCGGCGTCGGCGCG TGGTTCAAGCCGATCACGCTCGAATACGATTTCCCGTTCGCCGGCATCGGCAAGAAGGGCGGGTACTGA
Upstream 100 bases:
>100_bases GTTCGCATTAACGTTCTTCATCGCTTTTTTGTCTCGCCACCGGGTTCCGGGTCCGCGCGGGCGGGACGTGTGTCACGAGA TAAAAACAGGAGTGTCAATG
Downstream 100 bases:
>100_bases TCGCACCAGCGGTACACGGACGGCGCGCGACGAGCGCGCTGTCTCTTTAGAGAAATACGATGACATTCCCCAGAGCATAC GCATTCGCCGCCGCGATCCT
Product: putative antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRSSFVRSGVALAAACAALSATAAEYPIGKHQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGFA EGDWMPYLQVTYKLTKQGDAKWAAQGDLMGMVASDGPHYGDNVKLNGPGKYHLTLVVKPPMQTGHMAFGRHVDKETGVGA WFKPITLEYDFPFAGIGKKGGY
Sequences:
>Translated_182_residues MRSSFVRSGVALAAACAALSATAAEYPIGKHQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGFA EGDWMPYLQVTYKLTKQGDAKWAAQGDLMGMVASDGPHYGDNVKLNGPGKYHLTLVVKPPMQTGHMAFGRHVDKETGVGA WFKPITLEYDFPFAGIGKKGGY >Mature_182_residues MRSSFVRSGVALAAACAALSATAAEYPIGKHQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGFA EGDWMPYLQVTYKLTKQGDAKWAAQGDLMGMVASDGPHYGDNVKLNGPGKYHLTLVVKPPMQTGHMAFGRHVDKETGVGA WFKPITLEYDFPFAGIGKKGGY
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19588; Mature: 19588
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSFVRSGVALAAACAALSATAAEYPIGKHQIQGGMEIGAVYLQPITMDPEGMMRKASD CCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCCC SDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDAKWAAQGDLMGMVASDGPHYG CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEEECCCCCCC DNVKLNGPGKYHLTLVVKPPMQTGHMAFGRHVDKETGVGAWFKPITLEYDFPFAGIGKKG CCEEECCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCEECEEEEEECCCCCCCCCCC GY CC >Mature Secondary Structure MRSSFVRSGVALAAACAALSATAAEYPIGKHQIQGGMEIGAVYLQPITMDPEGMMRKASD CCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCCC SDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDAKWAAQGDLMGMVASDGPHYG CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCEEEEEECCCCCCC DNVKLNGPGKYHLTLVVKPPMQTGHMAFGRHVDKETGVGAWFKPITLEYDFPFAGIGKKG CCEEECCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCEECEEEEEECCCCCCCCCCC GY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]