Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447498
Identifier: 126447498
GI number: 126447498
Start: 1934180
End: 1934896
Strand: Reverse
Name: 126447498
Synonym: BMA10247_A2006
Alternate gene names: NA
Gene position: 1934896-1934180 (Counterclockwise)
Preceding gene: 126445740
Following gene: 126446926
Centisome position: 82.24
GC content: 72.11
Gene sequence:
>717_bases ATGAGCATGCGGGAAATGGCTGTCGCGCACGACGCGCTTGCGTACGAAGGGGATGACGATTCGGCGTCGCGCCGCGCGCT GACGCGAATCATGAAGGGCGGTGCGCGCGGCAGTGACGCCGATGCTGGCGCGCATGCGTTGCCCGCGGACCTGTCCGCGC GCGAATGGGTGCGTGAGTCGGCGCTGCCGGCGGCCGCCACCGCGGCGACCCTGCTCGCGCGCATCGAAGGCGAGCGCACG GCGGCGGGCGAGTGGCGCGTCGCGTTGCGCCCGGACGTCGTGCTGCGCGCGAAGAAGGCGGTGAGCTGCGTCGTCGCGCC CCAGGCGGGCGATCTCGTGCAGATCTGCCGCGAGGGCGAGCGCTGCTGGGTGCTTGCGGTGCTGGAGCGCGACGCGGCGG GTGACGAAACGAACGACAGGACGACTGACGAGGTGACGCTGGATTTTGGCGACGCGCACGTCGCGCTTCGCGCGCGCGAC GTGCGCGTCGAGGCGCGCGATCGTTTGTCGCTCGAGGCCGCGCAGCTCGCGAGCCGCGCGCAGGTGGTGACGCAGGCGGC GGCCGAGCGCCAGACGCACGTGAGCGGCACCGACGCGACGCACGCGGGCAGCACGCTCGTCCATACCGAGCGGCACTTGG CGATGCACGCGAAGAGCGCGGTGGTCACCGCGGCGTCGCTCTTGAAGATCGACGCGGGCCAGATTCACATGGGCTGA
Upstream 100 bases:
>100_bases CGGCGGCCGATACGCGGGACGCGATTTTCGAAGAAGCCACGAGCGCCGACGACCGGCTCTGGTGGCAGCGAGTTCAACCC GGAGCAAGAGGAGTTTGACG
Downstream 100 bases:
>100_bases GCGTTCTCGCTCGCGCCCGGTTTCTAGAAGGAGGTAGTAGTCATGTTTGCAAACTGCTCAGCGGGAGGGATGGCGATCGC GCCGGGGAACGACGTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSMREMAVAHDALAYEGDDDSASRRALTRIMKGGARGSDADAGAHALPADLSAREWVRESALPAAATAATLLARIEGERT AAGEWRVALRPDVVLRAKKAVSCVVAPQAGDLVQICREGERCWVLAVLERDAAGDETNDRTTDEVTLDFGDAHVALRARD VRVEARDRLSLEAAQLASRAQVVTQAAAERQTHVSGTDATHAGSTLVHTERHLAMHAKSAVVTAASLLKIDAGQIHMG
Sequences:
>Translated_238_residues MSMREMAVAHDALAYEGDDDSASRRALTRIMKGGARGSDADAGAHALPADLSAREWVRESALPAAATAATLLARIEGERT AAGEWRVALRPDVVLRAKKAVSCVVAPQAGDLVQICREGERCWVLAVLERDAAGDETNDRTTDEVTLDFGDAHVALRARD VRVEARDRLSLEAAQLASRAQVVTQAAAERQTHVSGTDATHAGSTLVHTERHLAMHAKSAVVTAASLLKIDAGQIHMG >Mature_237_residues SMREMAVAHDALAYEGDDDSASRRALTRIMKGGARGSDADAGAHALPADLSAREWVRESALPAAATAATLLARIEGERTA AGEWRVALRPDVVLRAKKAVSCVVAPQAGDLVQICREGERCWVLAVLERDAAGDETNDRTTDEVTLDFGDAHVALRARDV RVEARDRLSLEAAQLASRAQVVTQAAAERQTHVSGTDATHAGSTLVHTERHLAMHAKSAVVTAASLLKIDAGQIHMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25271; Mature: 25139
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMREMAVAHDALAYEGDDDSASRRALTRIMKGGARGSDADAGAHALPADLSAREWVRES CCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALPAAATAATLLARIEGERTAAGEWRVALRPDVVLRAKKAVSCVVAPQAGDLVQICREGE CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHEEHHHHEEEEECCCCCHHHHHHHCCC RCWVLAVLERDAAGDETNDRTTDEVTLDFGDAHVALRARDVRVEARDRLSLEAAQLASRA CEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECHHHHHHHHHHHHHHHH QVVTQAAAERQTHVSGTDATHAGSTLVHTERHLAMHAKSAVVTAASLLKIDAGQIHMG HHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEECCCEEECC >Mature Secondary Structure SMREMAVAHDALAYEGDDDSASRRALTRIMKGGARGSDADAGAHALPADLSAREWVRES CHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALPAAATAATLLARIEGERTAAGEWRVALRPDVVLRAKKAVSCVVAPQAGDLVQICREGE CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHEEHHHHEEEEECCCCCHHHHHHHCCC RCWVLAVLERDAAGDETNDRTTDEVTLDFGDAHVALRARDVRVEARDRLSLEAAQLASRA CEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECHHHHHHHHHHHHHHHH QVVTQAAAERQTHVSGTDATHAGSTLVHTERHLAMHAKSAVVTAASLLKIDAGQIHMG HHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA