Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445740
Identifier: 126445740
GI number: 126445740
Start: 1934899
End: 1935969
Strand: Reverse
Name: 126445740
Synonym: BMA10247_A2007
Alternate gene names: NA
Gene position: 1935969-1934899 (Counterclockwise)
Preceding gene: 126446433
Following gene: 126447498
Centisome position: 82.29
GC content: 68.81
Gene sequence:
>1071_bases ATGAGCAAGATCCGCTCGGCGGTGCCGCCGCCGCCGCTGCCCGAAGTCGTCGAGGGGCAGCGTTACGCGACGCCGCAGCG CGGCGTCACGCTGGCCGACACGATGTTCGTCGATTGCCACTTCGAGCGCGTCGAATGGACCGGCTGCCGGCTCGCGAACC TGCGCTTCGTGAACTGCACGTTCGACGCGAACCGCTTCGATCGCTGCGAGCTCGAGAAGCTCTCGTACGATTCGAGCCGG ATTCGCGCGGGCGCGTGGACGCAGAGCGCGCTGCAGCGCGTGTCGTTCAACGAATGCGAGCTCGACGGCGGCACGTGGAC GGGCAGCCTGGTGAAAGACGTCGTATGCACGCAGTCGAAGGGCGGCGCGTGGACGTTCGACGCGGTGCGCGGCGCGCACG TGTCGCTCGTCGCGGGCGATTACGCGGGCGTCACGCTGCGCGGCGGCCGCTGGAGCGATACGTCGTGGATCGGCAGCCGG CTCGCCGACCTGCGGCTCGAATCGGTCGAGCTCGAGAACCTGATCGCCGGGCAAAGCGGCTTCGAGCGCGTGGTGCTCGT CGAGTGCCGCGGCGTGAACGTGCGCTGGATCGATTCGCGGATCGAGCGGATGACCGTGCACGGCTGCGAGCTGAAGCAGG CGGCGTGGTCGCACAGCACATGGGCGACGGGCGAGATTCACGCGAGCCGGCTGCCGATCGCGAGCTTCGATCATGCGAGC GTCAACGGGCTGACGGTGACGAACAGCGAATTGCCGCAGGCGATCTTCGATAGCGCGAGCGTCGCGGACAGCGCGCTGCA AGGCGTGCGCGCGCCGCGCATCGCATTGCGCGACGCATGGCTCACGCGCGTGAACCTGTCGGGCGCGCAGATGCAGCAGC TCGATGCGCGCGGCGTGCATCTGGAGCGCGTCGACCTGCGCGGCGCCGATTGCCGCGGCGGCAACCTGATCGGCCAACTG AGCCACACGTGGGCGGCGGCCGATACGCGGGACGCGATTTTCGAAGAAGCCACGAGCGCCGACGACCGGCTCTGGTGGCA GCGAGTTCAACCCGGAGCAAGAGGAGTTTGA
Upstream 100 bases:
>100_bases ATCTCGTCAGGGTCCGCACGTCGTGGATCCATCCGCCGGAAGCGGGCGCGTGGCGCGGCAATCTGAGCGCCGGCCAGCTC GACGTGCCGAGGAGGGTGTG
Downstream 100 bases:
>100_bases CGATGAGCATGCGGGAAATGGCTGTCGCGCACGACGCGCTTGCGTACGAAGGGGATGACGATTCGGCGTCGCGCCGCGCG CTGACGCGAATCATGAAGGG
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSR IRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSR LADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQL SHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV
Sequences:
>Translated_356_residues MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSR IRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSR LADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQL SHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV >Mature_355_residues SKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSRI RAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRL ADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHASV NGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQLS HTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39225; Mature: 39094
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCT CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE FDANRFDRCELEKLSYDSSRIRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSK ECCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHCCCCEEECCCCEECHHHHHHHHHCCCC GGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRLADLRLESVELENLIAGQSG CCEEEEHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS CCEEEEEEECCCCEEEHHHHHHHHEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVH CCCEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCCE LERVDLRGADCRGGNLIGQLSHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV EEEEECCCCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure SKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCT CCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE FDANRFDRCELEKLSYDSSRIRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSK ECCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHCCCCEEECCCCEECHHHHHHHHHCCCC GGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRLADLRLESVELENLIAGQSG CCEEEEHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS CCEEEEEEECCCCEEEHHHHHHHHEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVH CCCEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCCE LERVDLRGADCRGGNLIGQLSHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV EEEEECCCCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA