Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126445740

Identifier: 126445740

GI number: 126445740

Start: 1934899

End: 1935969

Strand: Reverse

Name: 126445740

Synonym: BMA10247_A2007

Alternate gene names: NA

Gene position: 1935969-1934899 (Counterclockwise)

Preceding gene: 126446433

Following gene: 126447498

Centisome position: 82.29

GC content: 68.81

Gene sequence:

>1071_bases
ATGAGCAAGATCCGCTCGGCGGTGCCGCCGCCGCCGCTGCCCGAAGTCGTCGAGGGGCAGCGTTACGCGACGCCGCAGCG
CGGCGTCACGCTGGCCGACACGATGTTCGTCGATTGCCACTTCGAGCGCGTCGAATGGACCGGCTGCCGGCTCGCGAACC
TGCGCTTCGTGAACTGCACGTTCGACGCGAACCGCTTCGATCGCTGCGAGCTCGAGAAGCTCTCGTACGATTCGAGCCGG
ATTCGCGCGGGCGCGTGGACGCAGAGCGCGCTGCAGCGCGTGTCGTTCAACGAATGCGAGCTCGACGGCGGCACGTGGAC
GGGCAGCCTGGTGAAAGACGTCGTATGCACGCAGTCGAAGGGCGGCGCGTGGACGTTCGACGCGGTGCGCGGCGCGCACG
TGTCGCTCGTCGCGGGCGATTACGCGGGCGTCACGCTGCGCGGCGGCCGCTGGAGCGATACGTCGTGGATCGGCAGCCGG
CTCGCCGACCTGCGGCTCGAATCGGTCGAGCTCGAGAACCTGATCGCCGGGCAAAGCGGCTTCGAGCGCGTGGTGCTCGT
CGAGTGCCGCGGCGTGAACGTGCGCTGGATCGATTCGCGGATCGAGCGGATGACCGTGCACGGCTGCGAGCTGAAGCAGG
CGGCGTGGTCGCACAGCACATGGGCGACGGGCGAGATTCACGCGAGCCGGCTGCCGATCGCGAGCTTCGATCATGCGAGC
GTCAACGGGCTGACGGTGACGAACAGCGAATTGCCGCAGGCGATCTTCGATAGCGCGAGCGTCGCGGACAGCGCGCTGCA
AGGCGTGCGCGCGCCGCGCATCGCATTGCGCGACGCATGGCTCACGCGCGTGAACCTGTCGGGCGCGCAGATGCAGCAGC
TCGATGCGCGCGGCGTGCATCTGGAGCGCGTCGACCTGCGCGGCGCCGATTGCCGCGGCGGCAACCTGATCGGCCAACTG
AGCCACACGTGGGCGGCGGCCGATACGCGGGACGCGATTTTCGAAGAAGCCACGAGCGCCGACGACCGGCTCTGGTGGCA
GCGAGTTCAACCCGGAGCAAGAGGAGTTTGA

Upstream 100 bases:

>100_bases
ATCTCGTCAGGGTCCGCACGTCGTGGATCCATCCGCCGGAAGCGGGCGCGTGGCGCGGCAATCTGAGCGCCGGCCAGCTC
GACGTGCCGAGGAGGGTGTG

Downstream 100 bases:

>100_bases
CGATGAGCATGCGGGAAATGGCTGTCGCGCACGACGCGCTTGCGTACGAAGGGGATGACGATTCGGCGTCGCGCCGCGCG
CTGACGCGAATCATGAAGGG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSR
IRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSR
LADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS
VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQL
SHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV

Sequences:

>Translated_356_residues
MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSR
IRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSR
LADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS
VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQL
SHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV
>Mature_355_residues
SKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCTFDANRFDRCELEKLSYDSSRI
RAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSKGGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRL
ADLRLESVELENLIAGQSGFERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHASV
NGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVHLERVDLRGADCRGGNLIGQLS
HTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39225; Mature: 39094

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCT
CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE
FDANRFDRCELEKLSYDSSRIRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSK
ECCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHCCCCEEECCCCEECHHHHHHHHHCCCC
GGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRLADLRLESVELENLIAGQSG
CCEEEEHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
FERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS
CCEEEEEEECCCCEEEHHHHHHHHEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVH
CCCEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCCE
LERVDLRGADCRGGNLIGQLSHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV
EEEEECCCCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKIRSAVPPPPLPEVVEGQRYATPQRGVTLADTMFVDCHFERVEWTGCRLANLRFVNCT
CCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE
FDANRFDRCELEKLSYDSSRIRAGAWTQSALQRVSFNECELDGGTWTGSLVKDVVCTQSK
ECCCCCCCCHHHHHCCCCCCEECCCHHHHHHHHCCCCEEECCCCEECHHHHHHHHHCCCC
GGAWTFDAVRGAHVSLVAGDYAGVTLRGGRWSDTSWIGSRLADLRLESVELENLIAGQSG
CCEEEEHHHCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
FERVVLVECRGVNVRWIDSRIERMTVHGCELKQAAWSHSTWATGEIHASRLPIASFDHAS
CCEEEEEEECCCCEEEHHHHHHHHEECCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
VNGLTVTNSELPQAIFDSASVADSALQGVRAPRIALRDAWLTRVNLSGAQMQQLDARGVH
CCCEEEECCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCCE
LERVDLRGADCRGGNLIGQLSHTWAAADTRDAIFEEATSADDRLWWQRVQPGARGV
EEEEECCCCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA