Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447351
Identifier: 126447351
GI number: 126447351
Start: 1904828
End: 1905799
Strand: Reverse
Name: 126447351
Synonym: BMA10247_A1978
Alternate gene names: NA
Gene position: 1905799-1904828 (Counterclockwise)
Preceding gene: 126446147
Following gene: 126446458
Centisome position: 81.01
GC content: 62.76
Gene sequence:
>972_bases ATGAGCACGCTGCACCAGGACAGCATCATCATCGATGGCCTGAACATTTCGAAGTTCGAACGCTCGGTGTTCGAAGACAT GCAAAAGGGCGGCGTGACGGCCGCGAACTGCACGGTGTCCGTGTGGGAGAACTTCACGAAGACGGTCGACAACATCGCGC TGATGAAAAAGCAGATTCGCGAGAACGGCGAACTGCTGACGCTCGTGCGCACGACGGACGACATCCTCCGCGCGAAGCGG GAAGGCCGCACGGGCGTGATCCTCGGCTTCCAGAACGCGCACGCGTTCGAGGACAACCTGGGCTATGTCGAGGCGTTCGC CGACATGGGCGTGCGCGTCGTGCAGCTTTGCTACAACACGCAGAACCTCGTCGGCACCGGCTGCTACGAGCGCGACGGCG GGCTGTCGGATTTCGGCCGCGAGGTGATCACCGAGATGAACCGCGTCGGGATCATGGTCGACCTGTCGCACGTCGGCGGC AACACGTCGTCGGAGGCGATCGCGTTCTCGAAGAAACCCGTGTGCTACTCGCACTGCCTGCCGTCGGGTCTCAAGGAGCA TCCGCGCAACAAGAGCGACGCGCAACTGAAGGAGATCGCGGACGCGGGCGGCTTCGTCGGGGTGACGATGTTCGCGCCGT TCCTGAAGCGCGGGATCGACGCGACGATCGACGATTACATCGAGGCGATCGGCTACGTCGTGAACCTGATCGGCGAGGAC GCGGTCGGCATCGGCACCGATTTCACGCAGGGCTACAGCGTCGATTTCTTCGATTGGCTCACGCACGACAAGGGCCGCTA CCGCCGGCTCACGAATTTCGGCAAGGTCGTGAATCCTGAAGGCATCCGAACGATCGGCGAATTCCCGAACCTGACGGCCG CGATGGAGCGCGCGGGATGGAAGGCGTCGCGCATCCGCAAGATCATGGGCGAAAACTGGGTGCGCGTGTTCAAGGAGGTC TGGGGCGCGTAA
Upstream 100 bases:
>100_bases GCTTTGCGAACGCTTCCCGATCTACTGACACGCCGGAGCGGAACGAACGCCGCGCGTTCGCACGCCGACCGACCCACGCG CCGACAAGACTGGAGAATCC
Downstream 100 bases:
>100_bases GCGTGTGTCTTGCACGCCCGCATGCTTCGTTCTCAGCCCGTTTTCAACCGATCCGATACAGGACACGCGCGTGCTCGACG AGCGTCGGCGCGTGGACGAT
Product: renal dipeptidase family protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSTLHQDSIIIDGLNISKFERSVFEDMQKGGVTAANCTVSVWENFTKTVDNIALMKKQIRENGELLTLVRTTDDILRAKR EGRTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIDATIDDYIEAIGYVVNLIGED AVGIGTDFTQGYSVDFFDWLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKEV WGA
Sequences:
>Translated_323_residues MSTLHQDSIIIDGLNISKFERSVFEDMQKGGVTAANCTVSVWENFTKTVDNIALMKKQIRENGELLTLVRTTDDILRAKR EGRTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIDATIDDYIEAIGYVVNLIGED AVGIGTDFTQGYSVDFFDWLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKEV WGA >Mature_322_residues STLHQDSIIIDGLNISKFERSVFEDMQKGGVTAANCTVSVWENFTKTVDNIALMKKQIRENGELLTLVRTTDDILRAKRE GRTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGN TSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIDATIDDYIEAIGYVVNLIGEDA VGIGTDFTQGYSVDFFDWLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGWKASRIRKIMGENWVRVFKEVW GA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=281, Percent_Identity=24.9110320284698, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI4758190, Length=281, Percent_Identity=24.9110320284698, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI11641269, Length=282, Percent_Identity=24.113475177305, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI193211608, Length=245, Percent_Identity=22.0408163265306, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI193211610, Length=245, Percent_Identity=22.0408163265306, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI281362638, Length=318, Percent_Identity=28.9308176100629, Blast_Score=137, Evalue=8e-33, Organism=Drosophila melanogaster, GI281362636, Length=318, Percent_Identity=28.9308176100629, Blast_Score=137, Evalue=8e-33, Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=25.8675078864353, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI161083233, Length=296, Percent_Identity=25, Blast_Score=111, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35829; Mature: 35698
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHQDSIIIDGLNISKFERSVFEDMQKGGVTAANCTVSVWENFTKTVDNIALMKKQIR CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ENGELLTLVRTTDDILRAKREGRTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNT CCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVCYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCCCEEECCCCCHHHHHC PSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIDATIDDYIEAIGYVVNLIGED CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSVDFFDWLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGW CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCC KASRIRKIMGENWVRVFKEVWGA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STLHQDSIIIDGLNISKFERSVFEDMQKGGVTAANCTVSVWENFTKTVDNIALMKKQIR CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ENGELLTLVRTTDDILRAKREGRTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNT CCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVCYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCCCEEECCCCCHHHHHC PSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIDATIDDYIEAIGYVVNLIGED CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSVDFFDWLTHDKGRYRRLTNFGKVVNPEGIRTIGEFPNLTAAMERAGW CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCC KASRIRKIMGENWVRVFKEVWGA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]