Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is hmuU [H]
Identifier: 126447293
GI number: 126447293
Start: 2025293
End: 2026309
Strand: Direct
Name: hmuU [H]
Synonym: BMA10247_A2093
Alternate gene names: 126447293
Gene position: 2025293-2026309 (Clockwise)
Preceding gene: 126447939
Following gene: 126445718
Centisome position: 86.08
GC content: 75.32
Gene sequence:
>1017_bases ATGAGCCTCGCCGCCCGCCGCCATTCGGCCCGCCCGATATCCGCCGAGCGCGGTTCGACCTGCGCGTCGCGCGCCCTCGC CGCACTGCGCCGGCGACGCGCGCGATGGACGCTCGCCACGCTGATCGCCGCGCTCGCCGCCGCGTCGATCGCCGCACTCT GCATCGGCGCGTACCGGCTCTCGCCCGCGCAGTTGCTCGGCGCGCTCACCGCCACCGATGCGCAGCTCGCGGGCGACGCG GCGCTGCGCCAGGCGCGCGCGGTGCTCGTCGACATCCGCGCGCCGCGCGTCGTGCTCGCGCTCTTCGTCGGCGCGGGCTT CGGCGCGGCCGGCGCCGCGATGCAAGCGCTCTTTCGCAATCCGCTCGCCGATCCGGGCCTGATCGGCGTATCGAGCGGCG CGGCGCTCGTCTACCGGCTCGCCGTCGCGCGCGGCCGGCTCGCGCTGCCGCTGCTGCTGCTCGCCGGCATCGCGATCAAC GCGCTCGCCGGCGCGGGGATCGGGCTTCTCACCTACCTCGCCGACGATGCGCAACTGCGGTCGCTGACGTTCTGGAGCCT CGGCAGCGTCGGCGGCGCGCAATGGCGCACGATCGCCGCCGTCGCGCCGTTCGCGCTCGCCGGCTGCGTGCTGCTCGCGC GCGAGCGACACGCGCTGAACGCGCTGCAGCTCGGCGAAGCCGAAGCGATGCATCTCGGGGTGCCGGTGCCGCGCGTGAAG CGGCGCGTGCTCGTCGGCACCGCGATGTGCGTCGGCGCGCTCGTGTCGTGCACCGGCGCGATCGGTTTCATCGGGCTCGT CGCACCGCATTGCGTGCGGCTCGCGGCGGGCGCCGATCAGCGCATCGTGATACCGGGCGCGGCGCTTTTCGGCGCGCTGC TCGCGGTGGCCGCCGATCTCGCCGCGCGCACGCTCGCCGCGCCGGCCGAGATTCCGCTCGGCATCCTGACCGCGCTGATC GGCGCGCCGTTCTTTCTAGCGCTGCTCTGGAAGCGGCGCGGCGCGCTGGGAGGATGA
Upstream 100 bases:
>100_bases TCGCGCGCGGCGCGGCGACCGTCGCCGCCGCGCGCGCACCGCAGGCCGGGTGCCGCGCATACGCCTCGAGCGCGCCACCC CTCCCGTTCGACTTCACGCG
Downstream 100 bases:
>100_bases CGTTGCGCACGCGCCTTCGGCGCCGACCTGCCGGACAGGCCGACGACGTTCGCGCGCGGCGAGCGTGCCGCCGCATCGGC ACGCTCGCCGCCGCGATGCC
Product: hemin ABC transporter, permease protein
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSLAARRHSARPISAERGSTCASRALAALRRRRARWTLATLIAALAAASIAALCIGAYRLSPAQLLGALTATDAQLAGDA ALRQARAVLVDIRAPRVVLALFVGAGFGAAGAAMQALFRNPLADPGLIGVSSGAALVYRLAVARGRLALPLLLLAGIAIN ALAGAGIGLLTYLADDAQLRSLTFWSLGSVGGAQWRTIAAVAPFALAGCVLLARERHALNALQLGEAEAMHLGVPVPRVK RRVLVGTAMCVGALVSCTGAIGFIGLVAPHCVRLAAGADQRIVIPGAALFGALLAVAADLAARTLAAPAEIPLGILTALI GAPFFLALLWKRRGALGG
Sequences:
>Translated_338_residues MSLAARRHSARPISAERGSTCASRALAALRRRRARWTLATLIAALAAASIAALCIGAYRLSPAQLLGALTATDAQLAGDA ALRQARAVLVDIRAPRVVLALFVGAGFGAAGAAMQALFRNPLADPGLIGVSSGAALVYRLAVARGRLALPLLLLAGIAIN ALAGAGIGLLTYLADDAQLRSLTFWSLGSVGGAQWRTIAAVAPFALAGCVLLARERHALNALQLGEAEAMHLGVPVPRVK RRVLVGTAMCVGALVSCTGAIGFIGLVAPHCVRLAAGADQRIVIPGAALFGALLAVAADLAARTLAAPAEIPLGILTALI GAPFFLALLWKRRGALGG >Mature_337_residues SLAARRHSARPISAERGSTCASRALAALRRRRARWTLATLIAALAAASIAALCIGAYRLSPAQLLGALTATDAQLAGDAA LRQARAVLVDIRAPRVVLALFVGAGFGAAGAAMQALFRNPLADPGLIGVSSGAALVYRLAVARGRLALPLLLLAGIAINA LAGAGIGLLTYLADDAQLRSLTFWSLGSVGGAQWRTIAAVAPFALAGCVLLARERHALNALQLGEAEAMHLGVPVPRVKR RVLVGTAMCVGALVSCTGAIGFIGLVAPHCVRLAAGADQRIVIPGAALFGALLAVAADLAARTLAAPAEIPLGILTALIG APFFLALLWKRRGALGG
Specific function: Part of the binding-protein-dependent transport system for hemin; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788004, Length=287, Percent_Identity=37.6306620209059, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1790740, Length=294, Percent_Identity=37.0748299319728, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1790741, Length=282, Percent_Identity=32.9787234042553, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1786805, Length=291, Percent_Identity=37.4570446735395, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786804, Length=331, Percent_Identity=31.4199395770393, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786347, Length=281, Percent_Identity=29.5373665480427, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 34315; Mature: 34184
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAARRHSARPISAERGSTCASRALAALRRRRARWTLATLIAALAAASIAALCIGAYRL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAQLLGALTATDAQLAGDAALRQARAVLVDIRAPRVVLALFVGAGFGAAGAAMQALFRN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHHC PLADPGLIGVSSGAALVYRLAVARGRLALPLLLLAGIAINALAGAGIGLLTYLADDAQLR CCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH SLTFWSLGSVGGAQWRTIAAVAPFALAGCVLLARERHALNALQLGEAEAMHLGVPVPRVK HEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH RRVLVGTAMCVGALVSCTGAIGFIGLVAPHCVRLAAGADQRIVIPGAALFGALLAVAADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH AARTLAAPAEIPLGILTALIGAPFFLALLWKRRGALGG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLAARRHSARPISAERGSTCASRALAALRRRRARWTLATLIAALAAASIAALCIGAYRL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAQLLGALTATDAQLAGDAALRQARAVLVDIRAPRVVLALFVGAGFGAAGAAMQALFRN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCHHHHHHHHHHHC PLADPGLIGVSSGAALVYRLAVARGRLALPLLLLAGIAINALAGAGIGLLTYLADDAQLR CCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH SLTFWSLGSVGGAQWRTIAAVAPFALAGCVLLARERHALNALQLGEAEAMHLGVPVPRVK HEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH RRVLVGTAMCVGALVSCTGAIGFIGLVAPHCVRLAAGADQRIVIPGAALFGALLAVAADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH AARTLAAPAEIPLGILTALIGAPFFLALLWKRRGALGG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]