Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is exbB [H]
Identifier: 126446944
GI number: 126446944
Start: 1999440
End: 2000168
Strand: Direct
Name: exbB [H]
Synonym: BMA10247_A2063
Alternate gene names: 126446944
Gene position: 1999440-2000168 (Clockwise)
Preceding gene: 126445985
Following gene: 126447638
Centisome position: 84.99
GC content: 66.26
Gene sequence:
>729_bases ATGCAAAGCTACGGAATCGCGCACGTGTGGGCGCAAGGTGACTTCGTTACGCGCTTCATCGCGATCGCGCTCCTCGTGAT GTCGATCCTGTCTTGGATGGTGATCGTCATCAAGGGCTGGAACGTGATTCGCCTGAAGCGCCTGTCGAAAGACGCCGAAC AGTCGTTCTGGCATTCGGACGATTTCGACGAGGGCGTGGACAAGCTCGGCCGCGCATCATCGTCGTCGCAGGACAACCCG TTCCTCGCGCTCGCGCTGTCCGGCAAGGAGGCCGCCGACCACCACCATCAGACGCAGCCGCACCTGCGCGACCGGATGGA CGTGTCCGACTGGGTCACGCGCTGCCTGAAGGACACGATGGACGAAGGCATCGCGCGGATGCAAGGCGGCCTCGCGATCC TCGCGTCGATCGGCAGCACCGCGCCGTTCGTCGGCCTGTTCGGCACCGTGTGGGGCATCTATCACGCGCTGCTCGTGATC GGCGCGACGGGCCAGACGTCGATCGACCAGGTTGCGGGCCCCGTCGGCGAATCGCTGATCATGACCGCGTTCGGCCTGTT CGTCGCGATTCCCGCGGTGCTCGGTTACAACGCCCTCACACGCGCGAACAAGAGCGTCGTGAGCCGCCTGCGCCGCTTCG CGCACGGCCTGCATGCGTACTTCGTGACGGGCACGCGTCTCGCGTCGTCCCAGCGCGACGGGCTGCGCCTCGCCGCGCGC GCGAACTGA
Upstream 100 bases:
>100_bases GCAGAACGGGCAGCCGATGCGCGCCGCCTACACGCAGCCTTATGACTTCACTCTGACCGATTAATCTCGGCAATACCGAA AGAAACAACAAGGAAAGGAA
Downstream 100 bases:
>100_bases GCGGAGGTTCGCGATGGCAATGAACACCAGTTTCGGCGACGACGACGATGACGGCCTGATGAACGAGATCAACATGACGC CGCTCGTCGACGTCATGCTC
Product: MotA/TolQ/ExbB proton channel family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MQSYGIAHVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVDKLGRASSSSQDNP FLALALSGKEAADHHHQTQPHLRDRMDVSDWVTRCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVI GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYFVTGTRLASSQRDGLRLAAR AN
Sequences:
>Translated_242_residues MQSYGIAHVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVDKLGRASSSSQDNP FLALALSGKEAADHHHQTQPHLRDRMDVSDWVTRCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVI GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYFVTGTRLASSQRDGLRLAAR AN >Mature_242_residues MQSYGIAHVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVDKLGRASSSSQDNP FLALALSGKEAADHHHQTQPHLRDRMDVSDWVTRCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVI GATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYFVTGTRLASSQRDGLRLAAR AN
Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=215, Percent_Identity=30.6976744186047, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789381, Length=197, Percent_Identity=29.4416243654822, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 26379; Mature: 26379
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSYGIAHVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSD CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC DFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLRDRMDVSDWVTRCLKDTM CHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHH DEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLI HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH MTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYFVTGTRLASSQRDGLRLAAR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC AN CC >Mature Secondary Structure MQSYGIAHVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSD CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC DFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLRDRMDVSDWVTRCLKDTM CHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHH DEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLI HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH MTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYFVTGTRLASSQRDGLRLAAR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC AN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371459 [H]