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The map label for this gene is 126445985

Identifier: 126445985

GI number: 126445985

Start: 1998663

End: 1999403

Strand: Direct

Name: 126445985

Synonym: BMA10247_A2062

Alternate gene names: NA

Gene position: 1998663-1999403 (Clockwise)

Preceding gene: 126447741

Following gene: 126446944

Centisome position: 84.95

GC content: 71.39

Gene sequence:

>741_bases
ATGCAGGTTTCGAATTCCCTGCCGGGCGCATCCGCGCCGGCCTTCTCCCGTATGAATCCCCGCATCGTCACCGCTGCCGT
GACGGTTCTCGCCGGACACGCGCTCCTGCTGACCGGCGCGCTGCTGATGCGCAACGACGTGCCGCACCGTCCGCTCGAAT
CGAAGACGATCACCGCTCAGTTGCTGAGCGCGCCCGTCGCGCAGCCGGCCGGCATCCAGTCGGCGCCCGCGCCCACGCCG
CCCCAGCCCGTTCCGAAGGCCAAGCCGAAGCCGGCGCCGGCGCCCGTCCCCCGGCCCGTCGCGAAGCCGACGCCGCTGCC
CGTCACGCACGAGCCCGCGCCGAATGCGATCACCGCGCCGGAACCCGCGCCTGCCGCGCCCGTCGCGCCCGCCGAAACGA
GCGCGAAGGCCGCGCCGCCCGCGGGCGCGCCGACGAACCGCCCGACGATGGAAATCGTCGCGCCGAAGGAAGGCGCACAC
CTGAGCTGCCAGATCGCGAAGGCCGCCTATCCGTCGATGTCGAAGCGGCGCGGCGAAACGGGGGTCGTGAAGGTCCGCTT
CGTCGTCGGCTTGACGGGCAAGATCGAGAGCGCGCAGGTCGTCCAGAGCAGCGGCTTCGCGCGTCTGGACGATGCCGCGC
TCGACGCGATCCGCTCGTCGCCGTGCCAGCCGTATCTGCAGAACGGGCAGCCGATGCGCGCCGCCTACACGCAGCCTTAT
GACTTCACTCTGACCGATTAA

Upstream 100 bases:

>100_bases
CGGATTCGTGACTACCGTGTGCATCTCGTTGCTGATTTTCCGCAAGTGATGCAGCACTTCGCGGCGCGCCTCGCGCACGC
CGCCGCGCTACGAAGCTAAC

Downstream 100 bases:

>100_bases
TCTCGGCAATACCGAAAGAAACAACAAGGAAAGGAAATGCAAAGCTACGGAATCGCGCACGTGTGGGCGCAAGGTGACTT
CGTTACGCGCTTCATCGCGA

Product: TonB domain-containing protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB Like Protein; NB-Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAH
LSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPY
DFTLTD

Sequences:

>Translated_246_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAH
LSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPY
DFTLTD
>Mature_246_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAH
LSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPY
DFTLTD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25384; Mature: 25384

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQ
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPAPVPRPVAKPTPLPVTHEPAPNAITAP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRGET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCCCC
GVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPY
CEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
DFTLTD
EEEECC
>Mature Secondary Structure
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQ
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPAPVPRPVAKPTPLPVTHEPAPNAITAP
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRGET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCCCC
GVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQPY
CEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
DFTLTD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA