Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is yceI [C]
Identifier: 126446676
GI number: 126446676
Start: 1128834
End: 1129820
Strand: Direct
Name: yceI [C]
Synonym: BMA10247_A1156
Alternate gene names: 126446676
Gene position: 1128834-1129820 (Clockwise)
Preceding gene: 126446332
Following gene: 126446131
Centisome position: 47.98
GC content: 75.08
Gene sequence:
>987_bases ATGGATGCCGCCGGTTCATTCGCAAGCTTCGCCGCGACGCTCGCGTGCGCACTTAGCGCGTGGCTTGCGCCGAGTGCGGG CATCGCGCAGACGGCGTGGCCACCCGACGCGCCGCGCGTGGCCGGTGCGTCGGGACCGCCGCGCACGCCGGGCCTGGCGC GCACGCCGGCTGCGGTGACGGATGCGCCGGGCGCCGCAACCGCCGGCGCGCTCGCCGCGTCGCCGCCCGCGGCGACGCGC TACCGGCTCGATCCGCGGCACTCCGGCGTCACGTTCCGCGTCGACAATTTCTGGCACGCGCACCTGACGATGCGCTTCGC ACGGATGCGCGCGGAGCTGTCGGATGTCGGCGACGATCGGCTCGCGAGCCGCGTCGACGTGACGGTCGACGCGGCGAGCC TCGGCGCGAACGTGCCGTTCGTCGCCACGCTGGTAAAGGGCTCGGCGATGCTCGACGTCGCGCGTTACCCGGAGATCCGC TTCGTCGGCACGCGTTTCGAGCGCACCGGCGCGACGACGGGCGTTCTGACCGGCGAACTGACGATCCGCGCGATGACGCA CCCGATCACGCTCGCCGTGCGCTTCGACGCCGGCCGGCAACTGGAACCGGACACGGGCGCGCGAGCGGAGCGCGAGGGCG ACGAAAGCGGCGAAAGCGGCGAAAGCAACCCGGCTGAGCGGCGCGCGGGGCAGGGCCGTCGCGCAGCCGAGCTGCGCGAC GGGCGCCCGCGCGATGCGGGGCCGGGCGTCGCCGATTCGCGCGACGCGATGCGGCGCGAGACGGACTCGGGCAGCGCTCA CCGCGGCGCCGAGCCGCCCGAACGAATCGCGCGCGCCGCGCCCGATGCGGCGCGCCCGCTCGCTTTCGTCGCCGACGGTC ACTTCAGCCGGACCGCGTTCGGTTTGTCACGCTGGCTGCCCGCCGTCGGCGACGACGTGCGGCTGCGCATCCGCGCCGAG TTTGTCAGGGCGCGCGCGGACCCGTGA
Upstream 100 bases:
>100_bases AGCTCGGCGGCCATCCGCAGCGGTGGCGATAGCGCGCGAGCCGAGGCGAGGCGCGACGCCGAGGCCGAGGCCGTCGACGA GTCGATCATACGAGTCGAGC
Downstream 100 bases:
>100_bases GCCCGCGCGTCGGTTTTTCTTCATTCGAGGAGAGTCATCATGATCAGGAATGTGCTGATTGCGCTCGTCTGCGCGGCGCC TGTCGCGGCGCTCGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: YceI Like Family Protein
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDAAGSFASFAATLACALSAWLAPSAGIAQTAWPPDAPRVAGASGPPRTPGLARTPAAVTDAPGAATAGALAASPPAATR YRLDPRHSGVTFRVDNFWHAHLTMRFARMRAELSDVGDDRLASRVDVTVDAASLGANVPFVATLVKGSAMLDVARYPEIR FVGTRFERTGATTGVLTGELTIRAMTHPITLAVRFDAGRQLEPDTGARAEREGDESGESGESNPAERRAGQGRRAAELRD GRPRDAGPGVADSRDAMRRETDSGSAHRGAEPPERIARAAPDAARPLAFVADGHFSRTAFGLSRWLPAVGDDVRLRIRAE FVRARADP
Sequences:
>Translated_328_residues MDAAGSFASFAATLACALSAWLAPSAGIAQTAWPPDAPRVAGASGPPRTPGLARTPAAVTDAPGAATAGALAASPPAATR YRLDPRHSGVTFRVDNFWHAHLTMRFARMRAELSDVGDDRLASRVDVTVDAASLGANVPFVATLVKGSAMLDVARYPEIR FVGTRFERTGATTGVLTGELTIRAMTHPITLAVRFDAGRQLEPDTGARAEREGDESGESGESNPAERRAGQGRRAAELRD GRPRDAGPGVADSRDAMRRETDSGSAHRGAEPPERIARAAPDAARPLAFVADGHFSRTAFGLSRWLPAVGDDVRLRIRAE FVRARADP >Mature_328_residues MDAAGSFASFAATLACALSAWLAPSAGIAQTAWPPDAPRVAGASGPPRTPGLARTPAAVTDAPGAATAGALAASPPAATR YRLDPRHSGVTFRVDNFWHAHLTMRFARMRAELSDVGDDRLASRVDVTVDAASLGANVPFVATLVKGSAMLDVARYPEIR FVGTRFERTGATTGVLTGELTIRAMTHPITLAVRFDAGRQLEPDTGARAEREGDESGESGESNPAERRAGQGRRAAELRD GRPRDAGPGVADSRDAMRRETDSGSAHRGAEPPERIARAAPDAARPLAFVADGHFSRTAFGLSRWLPAVGDDVRLRIRAE FVRARADP
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34564; Mature: 34564
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAGSFASFAATLACALSAWLAPSAGIAQTAWPPDAPRVAGASGPPRTPGLARTPAAVT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAPGAATAGALAASPPAATRYRLDPRHSGVTFRVDNFWHAHLTMRFARMRAELSDVGDDR CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCEEEHHHHHHHHHHHHHHHHCCHHH LASRVDVTVDAASLGANVPFVATLVKGSAMLDVARYPEIRFVGTRFERTGATTGVLTGEL HHHHEEEEEEHHHHCCCCCHHHHHHCCCHHHHHHHCCCEEEEECCHHCCCCCCEEEEEEE TIRAMTHPITLAVRFDAGRQLEPDTGARAEREGDESGESGESNPAERRAGQGRRAAELRD EEEEEECEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCC GRPRDAGPGVADSRDAMRRETDSGSAHRGAEPPERIARAAPDAARPLAFVADGHFSRTAF CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHCCEEEEECCCCHHHHH GLSRWLPAVGDDVRLRIRAEFVRARADP HHHHHCCCCCCCEEEEEEEHHHHHCCCC >Mature Secondary Structure MDAAGSFASFAATLACALSAWLAPSAGIAQTAWPPDAPRVAGASGPPRTPGLARTPAAVT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAPGAATAGALAASPPAATRYRLDPRHSGVTFRVDNFWHAHLTMRFARMRAELSDVGDDR CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCEEEHHHHHHHHHHHHHHHHCCHHH LASRVDVTVDAASLGANVPFVATLVKGSAMLDVARYPEIRFVGTRFERTGATTGVLTGEL HHHHEEEEEEHHHHCCCCCHHHHHHCCCHHHHHHHCCCEEEEECCHHCCCCCCEEEEEEE TIRAMTHPITLAVRFDAGRQLEPDTGARAEREGDESGESGESNPAERRAGQGRRAAELRD EEEEEECEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCC GRPRDAGPGVADSRDAMRRETDSGSAHRGAEPPERIARAAPDAARPLAFVADGHFSRTAF CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHCCEEEEECCCCHHHHH GLSRWLPAVGDDVRLRIRAEFVRARADP HHHHHCCCCCCCEEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA