Click here to switch to the map view.

The map label for this gene is 126446332

Identifier: 126446332

GI number: 126446332

Start: 1127941

End: 1128765

Strand: Direct

Name: 126446332

Synonym: BMA10247_A1155

Alternate gene names: NA

Gene position: 1127941-1128765 (Clockwise)

Preceding gene: 126447139

Following gene: 126446676

Centisome position: 47.94

GC content: 77.7

Gene sequence:

>825_bases
ATGAGCGACGATCCCGATCTTTGCGTTGCACCGGAATCCGACGAGCCGGGGCTCCTCGCGCTGTCGGCGTTCGTCGACGG
CGAACTGCCGGACGCGCAGAGCCGCGCGATGGCCAGGCGGCTCGCGTCCGATCCGCGCGCGGCCGGCATCGCCGCGCACT
ATCGCGCGCAGCGTGCGGCGCTGCGCGCGCTGTTCGCCGATCCTGTCGCGCCGCGCCACGGCCCGTGCGTCGCGTGGCCG
GTGCGCACGCCGTGGTGGCGGCGCGCGGCGTTCGCGGGCGGCGCGCTGGCGGCGGGCGTCGCGCTCGGCTGGCTCGGCGG
CGCGCTCGCGCCGCGGTTCGCGCCGTCCGCCGCGCTGCAATGGGTCGCGCCCGCGGCCGCGCAACGCGCGTTCGCGCGCG
ACGCCGATCTCGCCTACGCGCTCTACGCGCCCGATGCGCGGCACCCGGTCGAAATCGCCGTCGGCCGCGACGGCGCGCCG
CTCGCGTGGCTGTCGGCGCGCGTCGGCCGCCGGATCGCCGCGCCGTCGCTCCGCGAGTACGGCTTCGCGCTGCTCGGCGC
GCGGCTGCTGCCCGGCGCGGGCGGCCCCGCCGCGCAATTCATGTACGAAAACGCGGCAGGCGAGCGGCTCGCGCTGTACG
TGAGCGCGTCCGCGCAGCGCGAGGCGGCGGTGCGGCCGTGGCGCGACGGCGGGCGGCACACCTTCTACTGGGTCAGCGAG
CGCACCGCGTACGCGCTCTCCGGCCAGCTCGACGAAGGCCGGCTGCGCACGATCGCGGCCGACGTCTGCAGCGAGCTCGG
CGGCCATCCGCAGCGGTGGCGATAG

Upstream 100 bases:

>100_bases
TGATGTCGCGGCTGTCGCGCGCGCGGGAGCGCATGCGCGCGCTGCTGACCGACGCGCCGCTGCGGCCGCCGCTGTCCCTT
ACCGCTGCGAGACATCATCG

Downstream 100 bases:

>100_bases
CGCGCGAGCCGAGGCGAGGCGCGACGCCGAGGCCGAGGCCGTCGACGAGTCGATCATACGAGTCGAGCATGGATGCCGCC
GGTTCATTCGCAAGCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Transmembrane Transcription Regulator

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSDDPDLCVAPESDEPGLLALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWP
VRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAVGRDGAP
LAWLSARVGRRIAAPSLREYGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSE
RTAYALSGQLDEGRLRTIAADVCSELGGHPQRWR

Sequences:

>Translated_274_residues
MSDDPDLCVAPESDEPGLLALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWP
VRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAVGRDGAP
LAWLSARVGRRIAAPSLREYGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSE
RTAYALSGQLDEGRLRTIAADVCSELGGHPQRWR
>Mature_273_residues
SDDPDLCVAPESDEPGLLALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAALRALFADPVAPRHGPCVAWPV
RTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQWVAPAAAQRAFARDADLAYALYAPDARHPVEIAVGRDGAPL
AWLSARVGRRIAAPSLREYGFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSER
TAYALSGQLDEGRLRTIAADVCSELGGHPQRWR

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29182; Mature: 29051

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDPDLCVAPESDEPGLLALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAA
CCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRALFADPVAPRHGPCVAWPVRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQ
HHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
WVAPAAAQRAFARDADLAYALYAPDARHPVEIAVGRDGAPLAWLSARVGRRIAAPSLREY
HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCHHCCCCHHHH
GFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSE
HHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCCCCCCCEEEEEEEC
RTAYALSGQLDEGRLRTIAADVCSELGGHPQRWR
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDDPDLCVAPESDEPGLLALSAFVDGELPDAQSRAMARRLASDPRAAGIAAHYRAQRAA
CCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRALFADPVAPRHGPCVAWPVRTPWWRRAAFAGGALAAGVALGWLGGALAPRFAPSAALQ
HHHHHHCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
WVAPAAAQRAFARDADLAYALYAPDARHPVEIAVGRDGAPLAWLSARVGRRIAAPSLREY
HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCHHCCCCHHHH
GFALLGARLLPGAGGPAAQFMYENAAGERLALYVSASAQREAAVRPWRDGGRHTFYWVSE
HHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHCCCCCCCCCCEEEEEEEC
RTAYALSGQLDEGRLRTIAADVCSELGGHPQRWR
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA