| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is ilvB [H]
Identifier: 126446508
GI number: 126446508
Start: 924211
End: 925884
Strand: Direct
Name: ilvB [H]
Synonym: BMA10247_A0978
Alternate gene names: 126446508
Gene position: 924211-925884 (Clockwise)
Preceding gene: 126447602
Following gene: 126447083
Centisome position: 39.28
GC content: 70.67
Gene sequence:
>1674_bases ATGTCTAACCCAACCACGACCACGGTCGGCGAGCTGATTGCCGCCTTCCTCGAACAATGCGGCGTGAAGACCGCCTTCGG CGTGATCTCGATTCACAACATGCCGATCCTCGACGCGATCCACACGCGCGGCAAGATCCGCTATGTCGGCGCGCGCGGCG AGGCGGGCGCCGTCAACATGGCCGACGGCCTCGCGCGCGTGTCGGGCGGGCTCGGCGTCGCGTTCACGAGCACGGGCACC GCGGCGGGCAACGCGGCGGGCGCGATGGTCGAGGCGCTGACGGCCGGCACCGCGCTCGTGCACATCACCGGGCAGATCGA GACGCCGTACCTCGATCAGGACCTCGCGTACATCCACGAAGCGCCCGACCAACTGTCGATGCTCAACGCGATCTCGAAGG CCGCGTATCGCGTGCGCACGGTCGAAGCCGTACTGCCGACGATCCGCGAGGCGGTGCGCGTCGCGATGACCGCGCCGAGC GGGCCCGTGTCGGTCGAAATTCCGATCGACATCCAGGCGGCCGAAATCGAGTGGCCGGACGATCTCGCGCCGCCTCACGT GGCGGTGCGCGAGCACGACGGCGCGCGCGTCGCGCAGCTCGCCGAGCGTCTGGCGGGCGCGCGCCGGCCGCTGCTGTGGC TGGGCGGCGGCGCGCGGCACGCGCGCGCGGAAGTCGAGCGGCTCGTCGCACTCGGCTTCGGCGTGGTCACGAGCGTGCAG GGGCGCGGCGTGCTGCCGGAGGATCACCCGGCGACGCTCGGCGCGTTCAACGTGCACGCGGCCGTCGAGCACTTCTACAA GACGTGCGATGCGGTCGTCGTCGTCGGCTCGCGGCTGCGCGGCAACGAGGCGCTGAAGTACAAGCTCGCGCTGCCGCGTC CGTTGTTCCGCGTCGACGCCGACGCGCTCGCCGACAACCGCGGCTACCGTAACGATCTGTTCGTGCACGGCGACGCGAAG CGCGTGCTCGCGGAGCTCGCGGATCGGCTCGAAGGCCGGCTCGCGATCGACCCGCGCTTCGCCGACGATCTCGCGGCCGC GCGCGCGGCGGCCGTCGCCGACGTCGGCAAGGGGCTCGGCCCGTACAAGCGCCTTGTCGACACGCTGCAGCAGGCGCTCG GACGCGACTACAACTGGGTGCGCGACGTGACGATCTCGAACAGCACGTGGGGCAACCGCCTGCTCAGGATCTTCGAGCCG CGCGCGGGCGTGCACGCGTTGGGCGGCGGAATCGGCCAGGGGATGCAGATGGCGATCGGCGCGGCGCTCGCCGGCAACGC GGCGAAGACGGTGTGCCTCGTCGGCGACGGCGGCCTGATGGTCAACGTCGGCGAGCTCGCGACCGCCGTGCAGGAGAACG CGAACGTGATGATCGTGCTGATGAACGACCAGTGCTACGGGGTGATCCGCAACATCCAGGACGCGCAGTACGGCGGGCGG CGCTGTTACGTCGAGCTGCATCAGCCGGATTTCGCGCAGTTCTGCGCGAGCCTGAAACTCGCGCATCACCGGATCACGTC GCTCGACGACGCGGAGCGCATCGTGCGCGAGGGGCTCGCGCACGAGGGGCCGGTGCTCGTCGAAGTCGACATGCTGTCGG TCGGCTCGTTCGCAGCCGCGTTCGCCGGCCCCCCCGTCAAGAAGGACACGCCCGCGGAGCGCCAGTATGCGTAA
Upstream 100 bases:
>100_bases CGGCCCGACGAGGCCGCGTGGGCGCTCTTTTATCTCGCAACGAATCTGTCGTCTTACACGACGGGCAGCCATATCGACGT ATCAGGAGGCTTTGCACGCC
Downstream 100 bases:
>100_bases CGCTCACGCTCCCGTCGACGTCGCGATGATCGGCTTCGGCGCGATCGGCGCGGCCGTCTATCGCGCGGTCGAGCACGACG CCGCGCTGCGCGTCGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSNPTTTTVGELIAAFLEQCGVKTAFGVISIHNMPILDAIHTRGKIRYVGARGEAGAVNMADGLARVSGGLGVAFTSTGT AAGNAAGAMVEALTAGTALVHITGQIETPYLDQDLAYIHEAPDQLSMLNAISKAAYRVRTVEAVLPTIREAVRVAMTAPS GPVSVEIPIDIQAAEIEWPDDLAPPHVAVREHDGARVAQLAERLAGARRPLLWLGGGARHARAEVERLVALGFGVVTSVQ GRGVLPEDHPATLGAFNVHAAVEHFYKTCDAVVVVGSRLRGNEALKYKLALPRPLFRVDADALADNRGYRNDLFVHGDAK RVLAELADRLEGRLAIDPRFADDLAAARAAAVADVGKGLGPYKRLVDTLQQALGRDYNWVRDVTISNSTWGNRLLRIFEP RAGVHALGGGIGQGMQMAIGAALAGNAAKTVCLVGDGGLMVNVGELATAVQENANVMIVLMNDQCYGVIRNIQDAQYGGR RCYVELHQPDFAQFCASLKLAHHRITSLDDAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPVKKDTPAERQYA
Sequences:
>Translated_557_residues MSNPTTTTVGELIAAFLEQCGVKTAFGVISIHNMPILDAIHTRGKIRYVGARGEAGAVNMADGLARVSGGLGVAFTSTGT AAGNAAGAMVEALTAGTALVHITGQIETPYLDQDLAYIHEAPDQLSMLNAISKAAYRVRTVEAVLPTIREAVRVAMTAPS GPVSVEIPIDIQAAEIEWPDDLAPPHVAVREHDGARVAQLAERLAGARRPLLWLGGGARHARAEVERLVALGFGVVTSVQ GRGVLPEDHPATLGAFNVHAAVEHFYKTCDAVVVVGSRLRGNEALKYKLALPRPLFRVDADALADNRGYRNDLFVHGDAK RVLAELADRLEGRLAIDPRFADDLAAARAAAVADVGKGLGPYKRLVDTLQQALGRDYNWVRDVTISNSTWGNRLLRIFEP RAGVHALGGGIGQGMQMAIGAALAGNAAKTVCLVGDGGLMVNVGELATAVQENANVMIVLMNDQCYGVIRNIQDAQYGGR RCYVELHQPDFAQFCASLKLAHHRITSLDDAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPVKKDTPAERQYA >Mature_556_residues SNPTTTTVGELIAAFLEQCGVKTAFGVISIHNMPILDAIHTRGKIRYVGARGEAGAVNMADGLARVSGGLGVAFTSTGTA AGNAAGAMVEALTAGTALVHITGQIETPYLDQDLAYIHEAPDQLSMLNAISKAAYRVRTVEAVLPTIREAVRVAMTAPSG PVSVEIPIDIQAAEIEWPDDLAPPHVAVREHDGARVAQLAERLAGARRPLLWLGGGARHARAEVERLVALGFGVVTSVQG RGVLPEDHPATLGAFNVHAAVEHFYKTCDAVVVVGSRLRGNEALKYKLALPRPLFRVDADALADNRGYRNDLFVHGDAKR VLAELADRLEGRLAIDPRFADDLAAARAAAVADVGKGLGPYKRLVDTLQQALGRDYNWVRDVTISNSTWGNRLLRIFEPR AGVHALGGGIGQGMQMAIGAALAGNAAKTVCLVGDGGLMVNVGELATAVQENANVMIVLMNDQCYGVIRNIQDAQYGGRR CYVELHQPDFAQFCASLKLAHHRITSLDDAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPVKKDTPAERQYA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=590, Percent_Identity=25.4237288135593, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI93004078, Length=481, Percent_Identity=25.1559251559252, Blast_Score=95, Evalue=2e-19, Organism=Escherichia coli, GI1790104, Length=540, Percent_Identity=28.5185185185185, Blast_Score=175, Evalue=7e-45, Organism=Escherichia coli, GI87081685, Length=549, Percent_Identity=26.4116575591985, Blast_Score=165, Evalue=8e-42, Organism=Escherichia coli, GI1786717, Length=476, Percent_Identity=27.3109243697479, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788716, Length=562, Percent_Identity=23.4875444839858, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787096, Length=543, Percent_Identity=23.2044198895028, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17542570, Length=571, Percent_Identity=24.3432574430823, Blast_Score=92, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6323755, Length=559, Percent_Identity=24.865831842576, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI19922626, Length=483, Percent_Identity=23.3954451345756, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 59129; Mature: 58998
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTTTTVGELIAAFLEQCGVKTAFGVISIHNMPILDAIHTRGKIRYVGARGEAGAVNM CCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCEEH ADGLARVSGGLGVAFTSTGTAAGNAAGAMVEALTAGTALVHITGQIETPYLDQDLAYIHE HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHC APDQLSMLNAISKAAYRVRTVEAVLPTIREAVRVAMTAPSGPVSVEIPIDIQAAEIEWPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEEEECCCC DLAPPHVAVREHDGARVAQLAERLAGARRPLLWLGGGARHARAEVERLVALGFGVVTSVQ CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC GRGVLPEDHPATLGAFNVHAAVEHFYKTCDAVVVVGSRLRGNEALKYKLALPRPLFRVDA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCHHHCCH DALADNRGYRNDLFVHGDAKRVLAELADRLEGRLAIDPRFADDLAAARAAAVADVGKGLG HHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCC PYKRLVDTLQQALGRDYNWVRDVTISNSTWGNRLLRIFEPRAGVHALGGGIGQGMQMAIG HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHEEECCCCCHHHHCCCCCCCHHHHHH AALAGNAAKTVCLVGDGGLMVNVGELATAVQENANVMIVLMNDQCYGVIRNIQDAQYGGR HHHCCCCCEEEEEEECCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHCCHHHCCCCC RCYVELHQPDFAQFCASLKLAHHRITSLDDAERIVREGLAHEGPVLVEVDMLSVGSFAAA EEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHH FAGPPVKKDTPAERQYA HCCCCCCCCCCCCCCCC >Mature Secondary Structure SNPTTTTVGELIAAFLEQCGVKTAFGVISIHNMPILDAIHTRGKIRYVGARGEAGAVNM CCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCEEH ADGLARVSGGLGVAFTSTGTAAGNAAGAMVEALTAGTALVHITGQIETPYLDQDLAYIHE HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHC APDQLSMLNAISKAAYRVRTVEAVLPTIREAVRVAMTAPSGPVSVEIPIDIQAAEIEWPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEEEECCCC DLAPPHVAVREHDGARVAQLAERLAGARRPLLWLGGGARHARAEVERLVALGFGVVTSVQ CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECC GRGVLPEDHPATLGAFNVHAAVEHFYKTCDAVVVVGSRLRGNEALKYKLALPRPLFRVDA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCHHHCCH DALADNRGYRNDLFVHGDAKRVLAELADRLEGRLAIDPRFADDLAAARAAAVADVGKGLG HHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCC PYKRLVDTLQQALGRDYNWVRDVTISNSTWGNRLLRIFEPRAGVHALGGGIGQGMQMAIG HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHEEECCCCCHHHHCCCCCCCHHHHHH AALAGNAAKTVCLVGDGGLMVNVGELATAVQENANVMIVLMNDQCYGVIRNIQDAQYGGR HHHCCCCCEEEEEEECCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHCCHHHCCCCC RCYVELHQPDFAQFCASLKLAHHRITSLDDAERIVREGLAHEGPVLVEVDMLSVGSFAAA EEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHH FAGPPVKKDTPAERQYA HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]