Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126446500

Identifier: 126446500

GI number: 126446500

Start: 1979601

End: 1981034

Strand: Reverse

Name: 126446500

Synonym: BMA10247_A2041

Alternate gene names: NA

Gene position: 1981034-1979601 (Counterclockwise)

Preceding gene: 126445971

Following gene: 126446086

Centisome position: 84.2

GC content: 65.55

Gene sequence:

>1434_bases
ATGGATGGAGAATTTTCGATGAAGCCGTTCGACGAAATGCTGCAACCCGGCGATACCGTACGAGCGCCGTATGAGCGCTT
GAAGCAATGGCTGGACACGCAGGATCCCGCGAGCCTCGCGCAGAAGGCGCACGACGCCGAAGGCGTGTTCCGCAAGACCG
GCATCACGTTCGCCGTGTATGGCGACGCCGAGGCCGCCGAGCGGCTGATTCCGTTCGACATCGTGCCGAGAATCATTTCG
GGTAGCGAATGGAACCGGCTGTCGCAGGGAATCGAGCAGCGCGTGATGGCGCTCAACGCGTTCCTCGACGACATCTATCA
CCGCCAGGAGATCGTGCGCGCGGGGATCGTGCCGAAGCATCTGATCGCGCACAACGATGCGTTCCTGCCGGAAATGATCG
ACTTCCGGCCGCCCGGAAACGTTTACACGCACATCATCGGCGTGGACATCGTACGGACCGCTGAAAATCAGTTCTACGTG
CTCGAGGACAACGCGCGCACGCCGTCCGGTGTGTCGTATATGCTCGAGAACCGCGAGACGATGATGCAGCTCTTTCCCGA
GCTGTTCCAGCAGGTGAAGGTGCGGCCCGTCGAGACGTATCCGCAGTTGCTGCGCCAGTCGCTCGCGGCCGTCTGCCCTC
CCGGCGGCAACGCCGACAATCCGACCGTCGCGGTGCTCACGCCCGGCATTCACAACTCCGCGTACTACGAGCATGCGTTC
CTCGCCGATCAGATGGGCGTGCATCTCGTCGAGGGCAGCGATCTGCAGGTGATCGGCGATCGCGTCGCGATGCGCACGAC
CGAAGGCTTTCGGCCGATCGACGTGCTGTACCGCCGCCTCGACGACGCGTTTCTCGATCCGCTCACGTTCCGGCCGGATT
CGGTGCTGGGCGTGGCCGGCATCATGGACGTCTACCGTGCGGGCAACGTGACGATCGCCAACGCGCCCGGCACCGGCATC
GCCGACGACAAGGCGATCTACTCGTACATGCCGGAGATCGTCGAGTTCTACACGGGCCGCCGCGCGATGCTCGAGAACGT
GCCGACGTGGCGCTGCGCGGAAGCCGACAGCCTCGAGTACGTGCTCGCGCATCTGGAGGAGCTCGTCGTGAAGGAGGTGC
ACGGCTCGGGCGGCTACGGGATGCTCGTCGGTCCCGCGGCATCGAAAGCCGAGCGCGACGCGTTCGCGGCGAAGCTGCGC
GCGAAGCCGTCGAACTACATCGCGCAGCCGACGCTCGCGCTGTCGACGACGCCGATCCTGACCGAGCGGGGGCTCGCGCC
GCGCCACGTCGACCTGCGGCCGTTCGTGCTCGTGTCCGACCGGATCCGCATCACGCCGGGCGGCCTCACGCGGGTCGCGC
TGAAGGAGGGTTCGCTCGTCGTCAATTCCAGTCAGGGCGGCGGCACCAAGGACACCTGGGTGCTCGCCGACTGA

Upstream 100 bases:

>100_bases
AAGTGCCAAATCAGACGGAAGCCGGGAGGATTCCAGCAAGGCACGCTCTTTGCTCATGAGTCATTGCGCCGGTTCGGCAT
GGACAGAGGCCGAGTGAATG

Downstream 100 bases:

>100_bases
GCGCACGCGCACGGCGGCGCTCGCGCGAACGCGTGCATGCTCGCGACGCGTTCGCGCGCGCCGCACCGAACAACGATCGG
AGTGGACGGCAAACATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MDGEFSMKPFDEMLQPGDTVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRKTGITFAVYGDAEAAERLIPFDIVPRIIS
GSEWNRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNDAFLPEMIDFRPPGNVYTHIIGVDIVRTAENQFYV
LEDNARTPSGVSYMLENRETMMQLFPELFQQVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAF
LADQMGVHLVEGSDLQVIGDRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNVTIANAPGTGI
ADDKAIYSYMPEIVEFYTGRRAMLENVPTWRCAEADSLEYVLAHLEELVVKEVHGSGGYGMLVGPAASKAERDAFAAKLR
AKPSNYIAQPTLALSTTPILTERGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD

Sequences:

>Translated_477_residues
MDGEFSMKPFDEMLQPGDTVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRKTGITFAVYGDAEAAERLIPFDIVPRIIS
GSEWNRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNDAFLPEMIDFRPPGNVYTHIIGVDIVRTAENQFYV
LEDNARTPSGVSYMLENRETMMQLFPELFQQVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAF
LADQMGVHLVEGSDLQVIGDRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNVTIANAPGTGI
ADDKAIYSYMPEIVEFYTGRRAMLENVPTWRCAEADSLEYVLAHLEELVVKEVHGSGGYGMLVGPAASKAERDAFAAKLR
AKPSNYIAQPTLALSTTPILTERGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD
>Mature_477_residues
MDGEFSMKPFDEMLQPGDTVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRKTGITFAVYGDAEAAERLIPFDIVPRIIS
GSEWNRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNDAFLPEMIDFRPPGNVYTHIIGVDIVRTAENQFYV
LEDNARTPSGVSYMLENRETMMQLFPELFQQVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAF
LADQMGVHLVEGSDLQVIGDRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNVTIANAPGTGI
ADDKAIYSYMPEIVEFYTGRRAMLENVPTWRCAEADSLEYVLAHLEELVVKEVHGSGGYGMLVGPAASKAERDAFAAKLR
AKPSNYIAQPTLALSTTPILTERGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 52740; Mature: 52740

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGEFSMKPFDEMLQPGDTVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRKTGITFAVY
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCEEEEEE
GDAEAAERLIPFDIVPRIISGSEWNRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKH
CCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LIAHNDAFLPEMIDFRPPGNVYTHIIGVDIVRTAENQFYVLEDNARTPSGVSYMLENRET
HHHCCCCCCHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH
MMQLFPELFQQVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
LADQMGVHLVEGSDLQVIGDRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAG
HHHHCCEEEECCCCEEEECCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IMDVYRAGNVTIANAPGTGIADDKAIYSYMPEIVEFYTGRRAMLENVPTWRCAEADSLEY
HHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHH
VLAHLEELVVKEVHGSGGYGMLVGPAASKAERDAFAAKLRAKPSNYIAQPTLALSTTPIL
HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH
TERGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD
HCCCCCCCCCCCCCEEEEECEEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEEC
>Mature Secondary Structure
MDGEFSMKPFDEMLQPGDTVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRKTGITFAVY
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCEEEEEE
GDAEAAERLIPFDIVPRIISGSEWNRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKH
CCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LIAHNDAFLPEMIDFRPPGNVYTHIIGVDIVRTAENQFYVLEDNARTPSGVSYMLENRET
HHHCCCCCCHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHH
MMQLFPELFQQVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
LADQMGVHLVEGSDLQVIGDRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAG
HHHHCCEEEECCCCEEEECCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IMDVYRAGNVTIANAPGTGIADDKAIYSYMPEIVEFYTGRRAMLENVPTWRCAEADSLEY
HHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHH
VLAHLEELVVKEVHGSGGYGMLVGPAASKAERDAFAAKLRAKPSNYIAQPTLALSTTPIL
HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH
TERGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD
HCCCCCCCCCCCCCEEEEECEEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]