Click here to switch to the map view.

The map label for this gene is cysW [H]

Identifier: 126446366

GI number: 126446366

Start: 2014795

End: 2015622

Strand: Reverse

Name: cysW [H]

Synonym: BMA10247_A2081

Alternate gene names: 126446366

Gene position: 2015622-2014795 (Counterclockwise)

Preceding gene: 126447569

Following gene: 126445732

Centisome position: 85.67

GC content: 70.05

Gene sequence:

>828_bases
GTGCAACGATCGTTCCTCGAACGCAGCCTGTTGCGCCGCTTCGGCGCGGCGCCGGCGGGCGGGCTGCTCGCGCTTTTCTT
CGTGCTGCCGCTCGCCGCGCTCGTGAGCGCGGCGTTCGCGGAGGGCGGCCGCGCGTTCGCCGCCGTGCTGCACGATCCGC
TCGTCGGCGACGCGATCGGCCGCTCGCTCGCGCTCGCGGTCGGCACGGGCACGCTGTCGACGTGCGTCGGCGTGCCGCTT
GCGCTGTCGTTCGCCGAACAGCCGCCCGCGCGGCGCCGCTGGTTGCTCGCGCTGCTCGGCGTGCCGCTCGCGTTTTCCGG
GCTCGTGATCGCGTACGGCTTCATCCTGACGTTCGGTCGCGCGGGTTTCGTCACGACACTGCTCGCCGGCTTAGGCGCGG
ATGCGGCGAAGGTCGGCGGCGTGATCTACACGACGTTTGGCCTCGTCGTCGCATATGCGTACTACCTGATTCCGCGCGTC
GCGCTGATGCTGCTTCCGGCGTTCGCGAACCTCGAGCGCAGGCCGCTCGAAGCGGCGATGTCGCTCGGCGCGAAGCCGTG
GCGCGCGTGGCTCGATGTCGCATGGCGCGAGCTGTGGCCGTCGGTCATGGCCGCGTGGTGCCTCGTCACGGCGATCGCGC
TCGGCACGTACGGCACCGCGCTCGCGCTCGCCGGCACGCAGATCAACATCCTGCCGCTGCTGATGTACCTGAAGCTGTCC
GACGGGCAGACCGATTTTTCTCAGGCCGCCGTGCTGTCGATCGTGTTGACGGCGCTGTGCACATGCGTGCTCGCGATGGG
GGAATACGTTGGGCGACGACATCGCTGA

Upstream 100 bases:

>100_bases
CCACAGGTGCGTGCGCTCGACGTCGCGAAGGCCGCCGCGCGCAAGGCCGAAGTCGACCGGCTATGGTCGCAGGCGGCGCT
TGGCCAGTAAGGAGCGCGAC

Downstream 100 bases:

>100_bases
ATACAAGCCGGATGTGGCCGACGCGCTCGCGCGCGTCGCGCTGCGTCAGCAGGGGCCGCGCCGCCATCTGATGCCGGTCG
GCCTGATCGGGCCGCGCGAA

Product: ABC transporter, permease protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQRSFLERSLLRRFGAAPAGGLLALFFVLPLAALVSAAFAEGGRAFAAVLHDPLVGDAIGRSLALAVGTGTLSTCVGVPL
ALSFAEQPPARRRWLLALLGVPLAFSGLVIAYGFILTFGRAGFVTTLLAGLGADAAKVGGVIYTTFGLVVAYAYYLIPRV
ALMLLPAFANLERRPLEAAMSLGAKPWRAWLDVAWRELWPSVMAAWCLVTAIALGTYGTALALAGTQINILPLLMYLKLS
DGQTDFSQAAVLSIVLTALCTCVLAMGEYVGRRHR

Sequences:

>Translated_275_residues
MQRSFLERSLLRRFGAAPAGGLLALFFVLPLAALVSAAFAEGGRAFAAVLHDPLVGDAIGRSLALAVGTGTLSTCVGVPL
ALSFAEQPPARRRWLLALLGVPLAFSGLVIAYGFILTFGRAGFVTTLLAGLGADAAKVGGVIYTTFGLVVAYAYYLIPRV
ALMLLPAFANLERRPLEAAMSLGAKPWRAWLDVAWRELWPSVMAAWCLVTAIALGTYGTALALAGTQINILPLLMYLKLS
DGQTDFSQAAVLSIVLTALCTCVLAMGEYVGRRHR
>Mature_275_residues
MQRSFLERSLLRRFGAAPAGGLLALFFVLPLAALVSAAFAEGGRAFAAVLHDPLVGDAIGRSLALAVGTGTLSTCVGVPL
ALSFAEQPPARRRWLLALLGVPLAFSGLVIAYGFILTFGRAGFVTTLLAGLGADAAKVGGVIYTTFGLVVAYAYYLIPRV
ALMLLPAFANLERRPLEAAMSLGAKPWRAWLDVAWRELWPSVMAAWCLVTAIALGTYGTALALAGTQINILPLLMYLKLS
DGQTDFSQAAVLSIVLTALCTCVLAMGEYVGRRHR

Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4132

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011866
- InterPro:   IPR005667 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29084; Mature: 29084

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSFLERSLLRRFGAAPAGGLLALFFVLPLAALVSAAFAEGGRAFAAVLHDPLVGDAIG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
RSLALAVGTGTLSTCVGVPLALSFAEQPPARRRWLLALLGVPLAFSGLVIAYGFILTFGR
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGFVTTLLAGLGADAAKVGGVIYTTFGLVVAYAYYLIPRVALMLLPAFANLERRPLEAAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SLGAKPWRAWLDVAWRELWPSVMAAWCLVTAIALGTYGTALALAGTQINILPLLMYLKLS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DGQTDFSQAAVLSIVLTALCTCVLAMGEYVGRRHR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRSFLERSLLRRFGAAPAGGLLALFFVLPLAALVSAAFAEGGRAFAAVLHDPLVGDAIG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
RSLALAVGTGTLSTCVGVPLALSFAEQPPARRRWLLALLGVPLAFSGLVIAYGFILTFGR
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGFVTTLLAGLGADAAKVGGVIYTTFGLVVAYAYYLIPRVALMLLPAFANLERRPLEAAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SLGAKPWRAWLDVAWRELWPSVMAAWCLVTAIALGTYGTALALAGTQINILPLLMYLKLS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DGQTDFSQAAVLSIVLTALCTCVLAMGEYVGRRHR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1708375 [H]