Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446265
Identifier: 126446265
GI number: 126446265
Start: 1883809
End: 1885512
Strand: Direct
Name: 126446265
Synonym: BMA10247_A1961
Alternate gene names: NA
Gene position: 1883809-1885512 (Clockwise)
Preceding gene: 126446802
Following gene: 126445748
Centisome position: 80.07
GC content: 67.84
Gene sequence:
>1704_bases ATGCAGACATCCCGTAAAGCACTGCCGCTCGCGCTGGGTCTTGCCATCGGCCTCGGCGCCGCGCTGCCCGCGTGGGCCGA TTCGAAGGCACCGAGCCCGCAGGAGGAAAGCCGGCGCGCGAGCCTCACGCGCGGCGTCGTGGCGCCTGCGGAACAGGCCG GCAAGACCGGGCAGTTCCGCCCCGGGGCCGTTGCCGTGACGCTGGCGAGCCCGGCGTTTCATGCGAAGAAGGCCGATGCG GCGGCGATGGCGCGCGAGTACGTCACCGCGCGCGCAGCGCAGCTCGGCCTCGACAAGGCCGCGCTCGCGAATCTCGTCGT CGCGTCCGAACGCGCCGACGCCGCGTTCACCGTCGTGCGCTTCCAGCAGCGCGCCGCGGGGCTGCCCGTCTATGACAGCG ACATCGCGGTCACGGTCGCGCCGGACGGCCGCGTGCTGTACGTCGCGAGCAAGGCGGTGAGCGGCGTCGCGGCCGTGTCG AGCAAGACGCAGGCGGTCGACGAGCAGCAGGCGCTCGACCGCGCGCGCGCCTACCTCGGCGTCGGCGGCTTCGTGAACGT GCAGTCGCAGCTCGTCGCATTCGTCGACGGCGCGGGCACGCATACCGCGTGGAAGGTGAGCGGCAGGCCGCAGGACAGCC TGCACGGCGACTGGGAGCTGATCATCGACGCGGGCAGCGGCGAAGTGCTGCGCGCGCAAGACAAGGCATCCTACGCAACG GACGGCAGCGGGCTCGTGTTCCGGCCGGATCCGTTGTCCCCGACGAAAAGCAGCTACGGCAGCCCCGGCTTCAAGGACAA CAACGATGCGGATTCGCCGCAACTGAGCGCCGCGCGCGTGCGCGTAACGCTCAAGGATCTGACGCAGACGAGCGGCGGCT ACAAGCTGAGCGGCCCGTATGCATCGTGCATCGATTTCGATGCGCCGCTCGACAAGGCGTGCCCGGTTCAGGCGTCGACG ACCTTCGATTTCACACGCTCGAACCTCTATTTCGAGGCGGTGAACGCGTATTACCACATCGACACGTTCCTGCGCTACGT GAACCTGACGCTCGGCATCAAGGCGTTGCCGTACCAGTACGCGGGCGGCGTCCAGTACGATCCGCACGGCCAATCCGGCG ACGATAACTCGTCGTACTCGCCGAGCTCCGGCAGGTTGTCGTTCGGGCAAGGCGGCGTCGACGACGCGGAAGACGCGGAT GTCGTGATTCACGAGCTCGGCCACGGCATCCATGACTGGATCACCAACGGCGGACTGTCGCAGGTCGAGGGGCTGTCCGA AGGCACGGGCGACTACCTCGCGGCCACATACAGCCGCGACTTCAACCAATGGAGCCCGTCCGACGCGCAGTATCACTGGG TCTTCAACTGGGACGGCCACAACGAATTCTGGGCCGGCCGCGTCACCAATTACAACGTCGGCCGCACGTACGCGCAGATC CGCAATGCCGCGATCCACACCGCCGGCCAGTACTGGGCGTCGTGCAACATGGTCGCGCGCGATGCGATCGGCGGCGCGGC GATGGACAAGGCGTTCCTGAAAGGATTGTCGATGACGAACGGCTCGACGAACCAGAAGGCCGCGGCGCAGGCGGTGCTGA CCGCGGCGGCGGCGCTCGGCTACAGCAGCGCGCAGCTCAATGCGATCGGCGACGCGTACAACAAGAGCTGCACGTACGGC GTGACCGTGCCGCAGAAGCTGTAA
Upstream 100 bases:
>100_bases CGGTTGCATCGGCCAGTCAAGGCCGGCGCACGGACCGGGTCGTCCCTGCGGTTCCCGTGGTTTCGTTTGTCATCCAAACC TTTGAAGACGAGGACAATCT
Downstream 100 bases:
>100_bases GCCGCACCTTGCTCATCGAGAAAAAGACGTAAGCGAGAACGACGCGGGGCGCGCGGCACGGTCTGCCGCGCGCCCGTCCC CTCGACCGCATCTCCCCTCA
Product: metallopeptidase domain-containing protein
Products: NA
Alternate protein names: Bacillolysin; Peptidase; Metallopeptidase Domain-Containing Protein
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAATYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Sequences:
>Translated_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAATYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL >Mature_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAATYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59870; Mature: 59870
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCHHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAATYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCHHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAATYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA