Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is yjcG [C]

Identifier: 126446259

GI number: 126446259

Start: 1988448

End: 1990463

Strand: Reverse

Name: yjcG [C]

Synonym: BMA10247_A2052

Alternate gene names: 126446259

Gene position: 1990463-1988448 (Counterclockwise)

Preceding gene: 126447916

Following gene: 126445971

Centisome position: 84.6

GC content: 67.41

Gene sequence:

>2016_bases
ATGCTGACGAATCGGCTGGTTCGCGCGTACGCGCTGTACACGATCGGCTTCGCCGCGTTCGTGCTGCTGCTGTGGCGGAT
CGAGCGCGCGACCGGGCCGGGCGTGTGGATCGGCTATGTGTTCCTGTTCGTGCCGATCGCGGTCTATGCGGTGATCGGGC
TGCTGTCGCGGACATCGGACCTCGTCGAATACTACGTGGCCGGGCGGCGCGTGCCGTCCGCGTTCAACGGCATGGCGACC
GCCGCCGACTGGCTGTCCGCGGCGTCGTTCATCGGCCTCGCGGGCTCGCTGTACGCGACCGGTTACGACGCGCTCGCGTA
CCTGATGGGCTGGACGGGTGGTTTCTGCCTCGTTGCGTTCCTGCTCGCGCCATACGTGCGCAAGCTCGCGCGCTACACGA
TTCCCGATTTTCTGGGCACGCGCTTTTCGAGCACGCTCGTCAGGGCGCTCGCGGCGATCGCCGCGATCCTGTGCTCGTTC
GTCTACCTGGTCGCGCAGATACAGGGCATCGGCCTCATCGCGACGCGCTTCATCGGCGTCGATTTCTCGATCGGCATCTT
CTGCGGCCTCGCGGGGATTCTCGTGTGCTCGTTTCTGGGCGGGATGCGGGCGGTCACGTGGACGCAGGTCGCGCAGTACA
TCATCCTGATCATTGCGTTCCTGCTGCCGGTTTCGCTGATCGCGATGAAGAACGGCCTCGGGCCCGTGCCGCAATTCAAT
TACGGCCATCTGATGTCGCGGGTCGAAACGCTCGAGGGCGAGATGCGCGACGCGCCGCAGGAGCGGCAGGTGCGCGAGAC
GTATCGTCGGCAGGCGGGCGCGATCCAGGCGAGGCTCGACCGGCTGCCGGCGTCTTACGACGAGGCGCGCGCGAAGCTGG
TCGATCAGGTCGCCGAGCTGCGCCGGCACAACGGGCCGCTGCGCGAGATCAACCAGCGCGAACGCGCACTTGCCGAGTTT
CCGCGCGATCCGGCGGCGGCGCGGGTGGTGTGGGAGCAGGCGCGCGACGAACTGCTCGCGCGCGCGGCGGCCCCGGTGCC
GATGCACGAGCCGTTTCCGGCCGCGAGCGGCGACGATCGCCGCCCGCGCGGGCGCAACTTCCTCGCGCTGCTGCTGTGCC
TGTCGCTCGGCACGGCGAGCCTGCCGCACATCCTGACGCGCTACAACACGACGACCTCGGTGGCGGCTGCGCGGCGCTCG
GTGGGCTGGACGCTGTTTTTCATCGCGCTGTTCTATTTGACGGTGCCGGTGCTCGCGGTGCTGATCAAGTACGAGATCCT
GACGAATCTGGTGGGGCGGCCGTTCGCCGATCTGCCCGCGTGGATCACGCAATGGCACCGTTTCGAGCCGGGGCTCATCG
GCGTTACCGACCTGTTGCGCGACGGCATTGTCCATTGGTCGGAGATCCAGATGCAGCCCGATATCGTCGTGCTCGCGGCG
CCGGAGATTGCGGGGCTGCCGTATGTGGTGTCGGGGCTGATCGCGGCGGGCGCGCTTGCCGCGGCGCTGTCGACGGCGGA
CGGGCTGCTGCTGACGATCGCGAACGCGCTGTCGCACGACGTCTACTACCACATGGTTGCGCCGGACGCGTCGAGCCAGC
GGCGCGTGACGATCTCGAAGGTGCTGTTGCTCGGCGTCGCGCTGTTTGCGTCGTATGTTGCGTCGCTGAATACGGGGAAG
ATTCTGTTTCTTGTCGGGGCGGCGTTCTCGCTCGCGGCGTCGAGTTTCTTTCCGGTGCTCGTGCTGGGCGTGTTCTGGAA
GCGCACGACGACGCGCGGCGCGGTGGCGGGGATGATGACGGGGCTTGGCGTGTGCGTGTACTACATCGTGTCGACGTATC
CGTTCTTCACGCAGATCACGGGCTTCGCGGGGCCGGGCTGGCTCGGCATCGAGCCGATCAGCTTGGGCGTGTTCGGCGTG
CCGGCCGGGTTTGCGACGGCGATCGTCGTGAGCCTGCTGGATCGGCGGCCGGATGCGTACACGAACGCGCTTGTCGACTA
TATCCGGCACCCGTGA

Upstream 100 bases:

>100_bases
TCGTGCTGATGCAGCGCGCGGACCGGGTCCTGCGGCGCGACTACGACGCGTACGCGGCCGAAGCGAAGCGCCGCGCCGCC
GCCTCGACGGACGCCGACGC

Downstream 100 bases:

>100_bases
CGGGTGGTTTTCGCCGGGGCTGGCGGCACGGCTGCGGAGTTTGCTATACTTGCCGTCTTCCCGGAGAGATGGATGAGTGG
TTTAAGTCGCACGCCTGGAA

Product: solute/sodium symporter (SSS) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MLTNRLVRAYALYTIGFAAFVLLLWRIERATGPGVWIGYVFLFVPIAVYAVIGLLSRTSDLVEYYVAGRRVPSAFNGMAT
AADWLSAASFIGLAGSLYATGYDALAYLMGWTGGFCLVAFLLAPYVRKLARYTIPDFLGTRFSSTLVRALAAIAAILCSF
VYLVAQIQGIGLIATRFIGVDFSIGIFCGLAGILVCSFLGGMRAVTWTQVAQYIILIIAFLLPVSLIAMKNGLGPVPQFN
YGHLMSRVETLEGEMRDAPQERQVRETYRRQAGAIQARLDRLPASYDEARAKLVDQVAELRRHNGPLREINQRERALAEF
PRDPAAARVVWEQARDELLARAAAPVPMHEPFPAASGDDRRPRGRNFLALLLCLSLGTASLPHILTRYNTTTSVAAARRS
VGWTLFFIALFYLTVPVLAVLIKYEILTNLVGRPFADLPAWITQWHRFEPGLIGVTDLLRDGIVHWSEIQMQPDIVVLAA
PEIAGLPYVVSGLIAAGALAAALSTADGLLLTIANALSHDVYYHMVAPDASSQRRVTISKVLLLGVALFASYVASLNTGK
ILFLVGAAFSLAASSFFPVLVLGVFWKRTTTRGAVAGMMTGLGVCVYYIVSTYPFFTQITGFAGPGWLGIEPISLGVFGV
PAGFATAIVVSLLDRRPDAYTNALVDYIRHP

Sequences:

>Translated_671_residues
MLTNRLVRAYALYTIGFAAFVLLLWRIERATGPGVWIGYVFLFVPIAVYAVIGLLSRTSDLVEYYVAGRRVPSAFNGMAT
AADWLSAASFIGLAGSLYATGYDALAYLMGWTGGFCLVAFLLAPYVRKLARYTIPDFLGTRFSSTLVRALAAIAAILCSF
VYLVAQIQGIGLIATRFIGVDFSIGIFCGLAGILVCSFLGGMRAVTWTQVAQYIILIIAFLLPVSLIAMKNGLGPVPQFN
YGHLMSRVETLEGEMRDAPQERQVRETYRRQAGAIQARLDRLPASYDEARAKLVDQVAELRRHNGPLREINQRERALAEF
PRDPAAARVVWEQARDELLARAAAPVPMHEPFPAASGDDRRPRGRNFLALLLCLSLGTASLPHILTRYNTTTSVAAARRS
VGWTLFFIALFYLTVPVLAVLIKYEILTNLVGRPFADLPAWITQWHRFEPGLIGVTDLLRDGIVHWSEIQMQPDIVVLAA
PEIAGLPYVVSGLIAAGALAAALSTADGLLLTIANALSHDVYYHMVAPDASSQRRVTISKVLLLGVALFASYVASLNTGK
ILFLVGAAFSLAASSFFPVLVLGVFWKRTTTRGAVAGMMTGLGVCVYYIVSTYPFFTQITGFAGPGWLGIEPISLGVFGV
PAGFATAIVVSLLDRRPDAYTNALVDYIRHP
>Mature_671_residues
MLTNRLVRAYALYTIGFAAFVLLLWRIERATGPGVWIGYVFLFVPIAVYAVIGLLSRTSDLVEYYVAGRRVPSAFNGMAT
AADWLSAASFIGLAGSLYATGYDALAYLMGWTGGFCLVAFLLAPYVRKLARYTIPDFLGTRFSSTLVRALAAIAAILCSF
VYLVAQIQGIGLIATRFIGVDFSIGIFCGLAGILVCSFLGGMRAVTWTQVAQYIILIIAFLLPVSLIAMKNGLGPVPQFN
YGHLMSRVETLEGEMRDAPQERQVRETYRRQAGAIQARLDRLPASYDEARAKLVDQVAELRRHNGPLREINQRERALAEF
PRDPAAARVVWEQARDELLARAAAPVPMHEPFPAASGDDRRPRGRNFLALLLCLSLGTASLPHILTRYNTTTSVAAARRS
VGWTLFFIALFYLTVPVLAVLIKYEILTNLVGRPFADLPAWITQWHRFEPGLIGVTDLLRDGIVHWSEIQMQPDIVVLAA
PEIAGLPYVVSGLIAAGALAAALSTADGLLLTIANALSHDVYYHMVAPDASSQRRVTISKVLLLGVALFASYVASLNTGK
ILFLVGAAFSLAASSFFPVLVLGVFWKRTTTRGAVAGMMTGLGVCVYYIVSTYPFFTQITGFAGPGWLGIEPISLGVFGV
PAGFATAIVVSLLDRRPDAYTNALVDYIRHP

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=164, Percent_Identity=33.5365853658537, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 72989; Mature: 72989

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]