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The map label for this gene is tnpA [H]

Identifier: 126446077

GI number: 126446077

Start: 1053556

End: 1054776

Strand: Reverse

Name: tnpA [H]

Synonym: BMA10247_A1119

Alternate gene names: 126446077

Gene position: 1054776-1053556 (Counterclockwise)

Preceding gene: 126446739

Following gene: 126447145

Centisome position: 44.83

GC content: 62.57

Gene sequence:

>1221_bases
TTGCTCGATCGCAAGGCACTTCAGGCACTGGGTTGCTGGACAGGCTATCGGCTGGAGCGGGTGGAGTGGCCGCAGGGCGA
TAGCCGCACGCTGTCGCTCTACCTGAAGCCGGTCAGTCAGATCATGTACTGCGAGCAATGCGGTGCGCGTTGCCAGCAGA
TTCATGAAACGACCGTACGGCGGGTACGTGATCTGCCGTTGTTCGAGTACCGGGTGGTGCTGCACGTGCCTCGACGCCGA
GTCTGGTGCGAACGCTGCGGCGCAGCGCGGCTGGAGAAGCTGGACTGGCTGGGCCGCTACCAGCGGGTGACGCAGCGGTT
TGCCAAGGCCTGCGAGAAGTTGCTGCAGGCCGCCAGCGTACAGGCCGTGGCGGCCTTCTACGATCTGGGCTGGCACACGG
TCAAATCGATCGACAAGATGCGCTTGCGCGCGCGCGTGGCCGAACCGGACTGGTCGACGATCCGTTATCTGGCGATGGAC
GAGTTCGCGCTCCATAAAGGCCATCGCTACGCCACGGTGGTGGTTGATCCGATCGGCCGACAGGTCCTCTGGGTTGGGCC
CGGACGGTCACGCGAGACGGCGCGCGCCTTCTTCGAACAACTCCCCGAAGGCGGGGCCGAGCGCATCGAAGCGGTCGCAA
TCGACATGACCACGGCCTATGAGCTGGAGATCAAGGAACAGTGCCCGCAGGCGGAAATCGTCTTTGACCTGTACCACGTC
GTGGCCAAGTACGGTCGCGAGGTGATCGATCGGGTACGGGTGGATCAGGCCAACCAACTGCGACATGACAAGCCGGCCCG
CAAGGTTCTGAAGTCCAGTCGCTGGTTGCTGCTGCGCAACCGTCATAACCTGAAGCCAGAACAGGCCGTGCATCTGAAGG
AACTGCTGGCGGCCAATCAGTCGCTGTTATGCGTCTATGTGCTGCGCGACGAGCTCAAACGGCTCTGGTTCTACCGCAAG
CCGGCCTGCGCGGAAAAGGCTTGGGGGCAATGGTTCGAACAGGCTCAGCAAAGCGGGATCGCCGCCTTGCAAAAGTTCGC
CCAGCGCTTGCAGGGTTACTGGCACGGAATCGTGGCCCGCTGCCGCCATCCGCTCAATACCAGCGTCGTCGAAGGCATCA
ACAACACGATCAAGGTCATCAAGCGCCGCGCTTACGGGTACCGCGACGAGCAATACTTCTTCCTCAAGATCCGCGCCGCG
TTCCCCGGGATTCCGCGATGA

Upstream 100 bases:

>100_bases
GAGCACGTGCTCAAGGAAAGGTTCATCGCAGAAAACCGTGGAGACTTGGAGAACGATTGCGTAACCTGACGCCTGATTTT
ATGGATGTCAGGAGGCGGAA

Downstream 100 bases:

>100_bases
ACCCAAGGAAAGCCGGGTCGTGCGCTTCGGCACCCGCAACGCGAAAATCGACGACGGCTTCATCCCCGCGGCGCGGCGCG
CGCACGGCCGCGAAACGCTC

Product: ISBma1, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTQRFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGGAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR

Sequences:

>Translated_406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTQRFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGGAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR
>Mature_406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTQRFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGGAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47465; Mature: 47465

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVR
CCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTQRFAKACEKLLQAASV
HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
QVLWVGPGRSRETARAFFEQLPEGGAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHEEEECCEEEEEHHHHCCCHHHHHHHHHH
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQ
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
SLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVAR
CEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVR
CCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTQRFAKACEKLLQAASV
HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
QVLWVGPGRSRETARAFFEQLPEGGAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHEEEECCEEEEEHHHHCCCHHHHHHHHHH
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQ
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
SLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVAR
CEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]