Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445896
Identifier: 126445896
GI number: 126445896
Start: 2105291
End: 2105950
Strand: Reverse
Name: 126445896
Synonym: BMA10247_A2171
Alternate gene names: NA
Gene position: 2105950-2105291 (Counterclockwise)
Preceding gene: 126447556
Following gene: 126447899
Centisome position: 89.51
GC content: 67.88
Gene sequence:
>660_bases ATGAGCGAAATCGAAGCGAAGCCGGATATCCGCAGCCGGTCGTCCGTGCCGGACAAAGCGGGCTCGGTCGTCGGCGCGCT GCCGGACGGCGTGTACGTCGTCGAATGCGGCGGCGCGAAGCTGCGTTGCCGGCGCGCGTTCAGCTGCCTTGTCGAACCGC GGATCGGCGATCGCGTCGTGGTGTGCGGCGCGGACAGCCGCTGCGTCTACGTGATCGCGATCCTGGCGCGGCCGAATGCG CACGGCGTGCAACTGCGCGTAGAAGGCGACCTCGTGCTGGAAGCGACGCGGCGCGTGTGCGTGACGAGCGGCGACGCGCT TCGCCTCGCGAGCCGCGAGCAGTTGTCGATCGAGACGCAGCGGCTGACGATGTCGGCGCGGCAGGCGGCGCTCACTTCCG AGAAGACGACGCTCACGAGCGCGGCGTTCGACGGCCGGCTCGGCAAGATCCGCCTGATCGGCCGGCTGCTGGAGACGGTG ATGGAACACGTCGCGCAATCGTGCCGAAGCAGTTTCCGCACGGTGGAGACCGTCGAGCATCTTCGCGCGTCGCATATCGA TCACGCGGCGGCGGAAAGCATGCGCATGCATGCGAAGCACACGCTGCTCACGGCCGAGACGCTGACGAAGATCGATGCGG CGCAGATCCATCTGGGCTAA
Upstream 100 bases:
>100_bases TGCGTTGTCGGCGCGTTGCCGATGTGTCGCGCGATGCCGCGGGCGCATCGTTTCGTCGTTATTCAGCCATTCGAAATAAT CGAAAGCGAGGGGAAAGGAC
Downstream 100 bases:
>100_bases CGCCGCGATTGGCGGGAACCGATCCTGAGGAGAGACTTCGATGGTCATGGTCAATTCGAGCGCGGGCGGCATGAACGCGG CGACGAGCATCAATCTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNA HGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETV MEHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG
Sequences:
>Translated_219_residues MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNA HGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETV MEHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG >Mature_218_residues SEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNAH GVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVM EHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23754; Mature: 23623
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVV CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE VCGADSRCVYVIAILARPNAHGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQ EECCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECHHEEEECCCEEEECCCHHHHHHHH RLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVMEHVAQSCRSSFRTVETVEH HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure SEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVV CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE VCGADSRCVYVIAILARPNAHGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQ EECCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECHHEEEECCCEEEECCCHHHHHHHH RLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVMEHVAQSCRSSFRTVETVEH HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA