Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126445896

Identifier: 126445896

GI number: 126445896

Start: 2105291

End: 2105950

Strand: Reverse

Name: 126445896

Synonym: BMA10247_A2171

Alternate gene names: NA

Gene position: 2105950-2105291 (Counterclockwise)

Preceding gene: 126447556

Following gene: 126447899

Centisome position: 89.51

GC content: 67.88

Gene sequence:

>660_bases
ATGAGCGAAATCGAAGCGAAGCCGGATATCCGCAGCCGGTCGTCCGTGCCGGACAAAGCGGGCTCGGTCGTCGGCGCGCT
GCCGGACGGCGTGTACGTCGTCGAATGCGGCGGCGCGAAGCTGCGTTGCCGGCGCGCGTTCAGCTGCCTTGTCGAACCGC
GGATCGGCGATCGCGTCGTGGTGTGCGGCGCGGACAGCCGCTGCGTCTACGTGATCGCGATCCTGGCGCGGCCGAATGCG
CACGGCGTGCAACTGCGCGTAGAAGGCGACCTCGTGCTGGAAGCGACGCGGCGCGTGTGCGTGACGAGCGGCGACGCGCT
TCGCCTCGCGAGCCGCGAGCAGTTGTCGATCGAGACGCAGCGGCTGACGATGTCGGCGCGGCAGGCGGCGCTCACTTCCG
AGAAGACGACGCTCACGAGCGCGGCGTTCGACGGCCGGCTCGGCAAGATCCGCCTGATCGGCCGGCTGCTGGAGACGGTG
ATGGAACACGTCGCGCAATCGTGCCGAAGCAGTTTCCGCACGGTGGAGACCGTCGAGCATCTTCGCGCGTCGCATATCGA
TCACGCGGCGGCGGAAAGCATGCGCATGCATGCGAAGCACACGCTGCTCACGGCCGAGACGCTGACGAAGATCGATGCGG
CGCAGATCCATCTGGGCTAA

Upstream 100 bases:

>100_bases
TGCGTTGTCGGCGCGTTGCCGATGTGTCGCGCGATGCCGCGGGCGCATCGTTTCGTCGTTATTCAGCCATTCGAAATAAT
CGAAAGCGAGGGGAAAGGAC

Downstream 100 bases:

>100_bases
CGCCGCGATTGGCGGGAACCGATCCTGAGGAGAGACTTCGATGGTCATGGTCAATTCGAGCGCGGGCGGCATGAACGCGG
CGACGAGCATCAATCTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNA
HGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETV
MEHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG

Sequences:

>Translated_219_residues
MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNA
HGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETV
MEHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG
>Mature_218_residues
SEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADSRCVYVIAILARPNAH
GVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVM
EHVAQSCRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23754; Mature: 23623

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVV
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE
VCGADSRCVYVIAILARPNAHGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQ
EECCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECHHEEEECCCEEEECCCHHHHHHHH
RLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVMEHVAQSCRSSFRTVETVEH
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
SEIEAKPDIRSRSSVPDKAGSVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVV
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE
VCGADSRCVYVIAILARPNAHGVQLRVEGDLVLEATRRVCVTSGDALRLASREQLSIETQ
EECCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECHHEEEECCCEEEECCCHHHHHHHH
RLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVMEHVAQSCRSSFRTVETVEH
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA