Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445870
Identifier: 126445870
GI number: 126445870
Start: 2095334
End: 2096836
Strand: Direct
Name: 126445870
Synonym: BMA10247_A2162
Alternate gene names: NA
Gene position: 2095334-2096836 (Clockwise)
Preceding gene: 126445827
Following gene: 126446279
Centisome position: 89.06
GC content: 69.46
Gene sequence:
>1503_bases GTGAGCCGGCGCGTGTGCCGTTCGTCGTTCGTCGTGCGTCATTCGTCGCGCGTCGCCTGTGCGTTGCCGCGCGGGAGCGC GCGCCTATCGTCAGATCACACGGCCGCTCGACGAACGCACGATGCGGCGTCGACATACCGCGCGCCGCCGCCGCGATATC CGAACCGTCGCCGGAAACGGCCGCGCATTCGCCCGATCCGCGCGAACGGGCACGAACGCGCTCACCCGAACGAAACAATC GACGAAAACGATGCGCGCGTCGGCCGGATCGAAGAAACTTCGGAACTTCAGCCGCGCAAGCGCACCCCAAGGAACAGAAG CGTTGAAATGTCGCGGCGCATCGCGCCGACGGGCGCCGCGTTGACATCGATCGGCATATCGGATCGGCCGGGGGCAGCTT TGATGAACCATCCTGGCACTACAAGGGCACGTCTCCTTCAATACGCGCGCCTGCTTTGCATCGCTGCGGGCACATCGCTT GCGGGCGCCATCGCGTCCGCGCCGGCATCGGCAACATCGGCGTCCTCGATGTCCTCGGCACCCACGGCGACCTCGGCGTC CGCCCCCGCGGCGCCATCGCGCGGCGCATCGCCCAAGCCGGGCAGCGCGGCGAGCGCGCTCGCCTCGCCGGCATCCGCCG CATCCGCGCCGTCGCCCGTGTCGAACGCGCCCGCGCCCCGCACGCTGGCCGTGCCCCCCCTGCCGCCGCTGACCGAGGCG GAATCGGCCGACGTGACGCGCCGCGCGCTCGCGCTGCGCGCGGCGTTCGCGCAGGACGTCGCACGGCGCCTGAACGTGCC CGACGCCGAACAGCGCGCGTACGGCGAACGCCTGCAGCAGACGCTCGACGCGAACGGCCTGGGCGAGCTCGCGCGCGAAT ACGTCGTGCTCGTCGATCGCGCGCCGAACGTGCAGGCAGTCTTTCTCTACTTTCGCACGACGCGCAGCAACGCGTGGCAG ATGATCGGCGCATCGCCCGTCGCAACCGGCCTGCCCGGCCAGTACGATCACTTCGTCACGCCGCTCGGCGTGTTCGAGCA CACGCCGGAGAACATGGATTTCCGCGCGGAAGGCACGACCAACGACAACGGCATCCGCGGCTACGGCCAGCGCGACATGC GCATCTACGATTTCGGCTGGACCGATGCGGAGCGCGGCTGGAGCAAGAGCGGCGTCTCGCAGATGCGCTTCCAGATGCAC GCGACCGATCCCGAGTACCTCGAACCGCTGCTCGGCATCCGCCATTCGAAGGGATGCGTGCGGATTCCGGCTTCGCTGAA CGTTTTCCTCGATCAGCACGGAATCCTCGACGCCGAATACGAAGCGCGCGCGGCAGGCGGCGATCCGCCGTGGGTATTGC GCGCGCACCGGCAAGTCACGCCGTGGGCGGGCCGCTATCTCGTCGTCATCGATTCGCAGCGCAAGACGCGCCCCGCATGG TCGCCCGCGCCGGGCAAGAAGGCGCAGGCGAAGCTGCCGAAGGGCGGCGACACGGCGGATTGA
Upstream 100 bases:
>100_bases ATGGGCCGTCTATCGCGGCATGCTCGCGTCGGCGAAACGGACGTGGTTCGTGCGGGAGAGGTGACGGCGGGGGGCGTCGC GCGCGAGGGTTCGTGCATTC
Downstream 100 bases:
>100_bases GCGTGCGTGCTTCGATGGGAGGGAGTGCAGGCGGTGCGGGTGACGTGGTTGACGTGGTTGACGTGGGTAGCGTGGGTAGC GCGGTTGGGACGGTCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSRRVCRSSFVVRHSSRVACALPRGSARLSSDHTAARRTHDAASTYRAPPPRYPNRRRKRPRIRPIRANGHERAHPNETI DENDARVGRIEETSELQPRKRTPRNRSVEMSRRIAPTGAALTSIGISDRPGAALMNHPGTTRARLLQYARLLCIAAGTSL AGAIASAPASATSASSMSSAPTATSASAPAAPSRGASPKPGSAASALASPASAASAPSPVSNAPAPRTLAVPPLPPLTEA ESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQ MIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWSKSGVSQMRFQMH ATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVTPWAGRYLVVIDSQRKTRPAW SPAPGKKAQAKLPKGGDTAD
Sequences:
>Translated_500_residues MSRRVCRSSFVVRHSSRVACALPRGSARLSSDHTAARRTHDAASTYRAPPPRYPNRRRKRPRIRPIRANGHERAHPNETI DENDARVGRIEETSELQPRKRTPRNRSVEMSRRIAPTGAALTSIGISDRPGAALMNHPGTTRARLLQYARLLCIAAGTSL AGAIASAPASATSASSMSSAPTATSASAPAAPSRGASPKPGSAASALASPASAASAPSPVSNAPAPRTLAVPPLPPLTEA ESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQ MIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWSKSGVSQMRFQMH ATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVTPWAGRYLVVIDSQRKTRPAW SPAPGKKAQAKLPKGGDTAD >Mature_499_residues SRRVCRSSFVVRHSSRVACALPRGSARLSSDHTAARRTHDAASTYRAPPPRYPNRRRKRPRIRPIRANGHERAHPNETID ENDARVGRIEETSELQPRKRTPRNRSVEMSRRIAPTGAALTSIGISDRPGAALMNHPGTTRARLLQYARLLCIAAGTSLA GAIASAPASATSASSMSSAPTATSASAPAAPSRGASPKPGSAASALASPASAASAPSPVSNAPAPRTLAVPPLPPLTEAE SADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQM IGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWSKSGVSQMRFQMHA TDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVTPWAGRYLVVIDSQRKTRPAWS PAPGKKAQAKLPKGGDTAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53964; Mature: 53833
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRVCRSSFVVRHSSRVACALPRGSARLSSDHTAARRTHDAASTYRAPPPRYPNRRRKR CCCHHHHHHHHEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCC PRIRPIRANGHERAHPNETIDENDARVGRIEETSELQPRKRTPRNRSVEMSRRIAPTGAA CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHCCCCCHH LTSIGISDRPGAALMNHPGTTRARLLQYARLLCIAAGTSLAGAIASAPASATSASSMSSA HHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCC PTATSASAPAAPSRGASPKPGSAASALASPASAASAPSPVSNAPAPRTLAVPPLPPLTEA CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCC ESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDR CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEC APNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTT CCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCEEECCCC NDNGIRGYGQRDMRIYDFGWTDAERGWSKSGVSQMRFQMHATDPEYLEPLLGIRHSKGCV CCCCCCCCCCCCCEEEECCCCCHHCCCCCCCHHHHEEEEECCCHHHHHHHHCCCCCCCCE RIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVTPWAGRYLVVIDSQRKTRPAW ECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCC SPAPGKKAQAKLPKGGDTAD CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRRVCRSSFVVRHSSRVACALPRGSARLSSDHTAARRTHDAASTYRAPPPRYPNRRRKR CCHHHHHHHHEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCC PRIRPIRANGHERAHPNETIDENDARVGRIEETSELQPRKRTPRNRSVEMSRRIAPTGAA CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHCCCCCHH LTSIGISDRPGAALMNHPGTTRARLLQYARLLCIAAGTSLAGAIASAPASATSASSMSSA HHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCC PTATSASAPAAPSRGASPKPGSAASALASPASAASAPSPVSNAPAPRTLAVPPLPPLTEA CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCC ESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDR CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEC APNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTT CCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCEEECCCC NDNGIRGYGQRDMRIYDFGWTDAERGWSKSGVSQMRFQMHATDPEYLEPLLGIRHSKGCV CCCCCCCCCCCCCEEEECCCCCHHCCCCCCCHHHHEEEEECCCHHHHHHHHCCCCCCCCE RIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVTPWAGRYLVVIDSQRKTRPAW ECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCC SPAPGKKAQAKLPKGGDTAD CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA