Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445827
Identifier: 126445827
GI number: 126445827
Start: 2093942
End: 2095297
Strand: Direct
Name: 126445827
Synonym: BMA10247_A2161
Alternate gene names: NA
Gene position: 2093942-2095297 (Clockwise)
Preceding gene: 126447748
Following gene: 126445870
Centisome position: 89.0
GC content: 66.67
Gene sequence:
>1356_bases ATGGCCAACATGACACAGGCAGCCGCCGACGGCGAGCTGGATCTTTCGACGCTCGCCCTGCCGCAGGCCGCGCGAATGCC GGCGTTCTCGCTGACGATGGCGTGGTGGGCCGTCTGCAGCGCGGTGTTCTACATCGTCGTCGGCGCGACGCTCGCGCTCG ATTACGGCGCGCGCAACGCGCTGATCGGCATGGTGCTGTCGGTCGTCTCGTACGGCCTCGTGAACGCGGCGATCAGCCGC TACGCGATTCGCACGGGGCTGTCCGTCGCGTTGTTCTCGCGCGTGCTGTTCGGCAGCGCTGGCGCCGCGCTCGCGACGCT GATCTTCTTCGCGACCGCGATCTACTACGCGGTATTCGAAGGCTCGGTGATCGCCGTCGCCGCGCATGGCCTGATGCCCG CGCTCGACTACAAGTGGGCCGCGCTGATCGTCGTCTGCTACAGCGTGCCGCTCGTGTTCGGCAGCGTCCAGCACTGGCTC GACAAGTTCAACGGCGTGCTGCTGCCGTTCTATCTGCTCGGCCTGCTCGCGGCCGTCGCGCTCGCGACGCACCGCTACGG CTACCACGCCGCCTGGCTCGATTTCGGCCCGAAGGGCGGCGCGCCCGCCCACGGCTGGTGGCACTGCTTCGTCTACTACA TGGGCGTGTGGGTGCTGATGATGTTCACGTTCGACTACGCCCGCTTCGGCCGCGAGGCGGACGCGGGCTATCACGGCCGC TGGAACTTCGGCATGCCGTTCTATCTCGTCACGTTCGTCGTCAACGGCGCGGCCGGTATCTATCTCGTCAGCACGATTCC GGGGCTCGGCGCGCTCTCCGAAGTGTCCGTCGTCACCGCGCTGCTCAAGCTGATGGGCGTGTGGGGGCTGCTGTTCGTGT GGGTCACGCAATCGCGGATCAACACCGCGAACTACTATCTCGCGACCGTCAACATGCAGGCGTTCTTTCAAAAAGCCGCC GGGCTGCGCGCGCCGAAATACGTGTGGGCGCTCGTCGTCGGCGCGGTGGTCTACGCGCTGATGATGGCCGACATCTTCTC GAAGCTGCTGCAGGCACTCGCATGGCAGGGCGTGTTCATCGTCGCGTGGGTCGGCGTCGCGCTCGCGCACATCCTCTCGA CGCGCTACGAGGAACTGCTCGGCAGCGGCATCGAGTGCCGCGACACGCACGTTCCCGCGTTCAATCCGGGCGGACTGAGC GCGTGGTTCGCGGGTGTGTTCGCCGGCATGATGCTGACCACGGCGACAGGTTTCGCGCAATCGCTGTCCGCGCCGGTGAC GTTCGTCGTGTCATGGGCCGTCTATCGCGGCATGCTCGCGTCGGCGAAACGGACGTGGTTCGTGCGGGAGAGGTGA
Upstream 100 bases:
>100_bases GACGTTGTGACGCGCTCCGCGTCGCACCGCCGCCGTTCATCGCGCGGCGCGCGGCGCACGCGGCGCATTTCCCGAATGCA ATTGCCAACGGAGCAGGATC
Downstream 100 bases:
>100_bases CGGCGGGGGGCGTCGCGCGCGAGGGTTCGTGCATTCGTGAGCCGGCGCGTGTGCCGTTCGTCGTTCGTCGTGCGTCATTC GTCGCGCGTCGCCTGTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Permease For Cytosine/Purines
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MANMTQAAADGELDLSTLALPQAARMPAFSLTMAWWAVCSAVFYIVVGATLALDYGARNALIGMVLSVVSYGLVNAAISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHGLMPALDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLLGLLAAVALATHRYGYHAAWLDFGPKGGAPAHGWWHCFVYYMGVWVLMMFTFDYARFGREADAGYHGR WNFGMPFYLVTFVVNGAAGIYLVSTIPGLGALSEVSVVTALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQKAA GLRAPKYVWALVVGAVVYALMMADIFSKLLQALAWQGVFIVAWVGVALAHILSTRYEELLGSGIECRDTHVPAFNPGGLS AWFAGVFAGMMLTTATGFAQSLSAPVTFVVSWAVYRGMLASAKRTWFVRER
Sequences:
>Translated_451_residues MANMTQAAADGELDLSTLALPQAARMPAFSLTMAWWAVCSAVFYIVVGATLALDYGARNALIGMVLSVVSYGLVNAAISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHGLMPALDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLLGLLAAVALATHRYGYHAAWLDFGPKGGAPAHGWWHCFVYYMGVWVLMMFTFDYARFGREADAGYHGR WNFGMPFYLVTFVVNGAAGIYLVSTIPGLGALSEVSVVTALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQKAA GLRAPKYVWALVVGAVVYALMMADIFSKLLQALAWQGVFIVAWVGVALAHILSTRYEELLGSGIECRDTHVPAFNPGGLS AWFAGVFAGMMLTTATGFAQSLSAPVTFVVSWAVYRGMLASAKRTWFVRER >Mature_450_residues ANMTQAAADGELDLSTLALPQAARMPAFSLTMAWWAVCSAVFYIVVGATLALDYGARNALIGMVLSVVSYGLVNAAISRY AIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHGLMPALDYKWAALIVVCYSVPLVFGSVQHWLD KFNGVLLPFYLLGLLAAVALATHRYGYHAAWLDFGPKGGAPAHGWWHCFVYYMGVWVLMMFTFDYARFGREADAGYHGRW NFGMPFYLVTFVVNGAAGIYLVSTIPGLGALSEVSVVTALLKLMGVWGLLFVWVTQSRINTANYYLATVNMQAFFQKAAG LRAPKYVWALVVGAVVYALMMADIFSKLLQALAWQGVFIVAWVGVALAHILSTRYEELLGSGIECRDTHVPAFNPGGLSA WFAGVFAGMMLTTATGFAQSLSAPVTFVVSWAVYRGMLASAKRTWFVRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48926; Mature: 48795
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMTQAAADGELDLSTLALPQAARMPAFSLTMAWWAVCSAVFYIVVGATLALDYGARNA CCCCCCCCCCCCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LIGMVLSVVSYGLVNAAISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHGLMPALDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLLGLLAAVA CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATHRYGYHAAWLDFGPKGGAPAHGWWHCFVYYMGVWVLMMFTFDYARFGREADAGYHGR HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC WNFGMPFYLVTFVVNGAAGIYLVSTIPGLGALSEVSVVTALLKLMGVWGLLFVWVTQSRI CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFQKAAGLRAPKYVWALVVGAVVYALMMADIFSKLLQALAWQGVFI CCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSTRYEELLGSGIECRDTHVPAFNPGGLSAWFAGVFAGMMLTTATGFAQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLSAPVTFVVSWAVYRGMLASAKRTWFVRER HHCCHHHHHHHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure ANMTQAAADGELDLSTLALPQAARMPAFSLTMAWWAVCSAVFYIVVGATLALDYGARNA CCCCCCCCCCCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LIGMVLSVVSYGLVNAAISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHGLMPALDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLLGLLAAVA CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATHRYGYHAAWLDFGPKGGAPAHGWWHCFVYYMGVWVLMMFTFDYARFGREADAGYHGR HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC WNFGMPFYLVTFVVNGAAGIYLVSTIPGLGALSEVSVVTALLKLMGVWGLLFVWVTQSRI CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFQKAAGLRAPKYVWALVVGAVVYALMMADIFSKLLQALAWQGVFI CCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSTRYEELLGSGIECRDTHVPAFNPGGLSAWFAGVFAGMMLTTATGFAQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLSAPVTFVVSWAVYRGMLASAKRTWFVRER HHCCHHHHHHHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA