Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126445859

Identifier: 126445859

GI number: 126445859

Start: 2214558

End: 2216123

Strand: Reverse

Name: 126445859

Synonym: BMA10247_A2281

Alternate gene names: NA

Gene position: 2216123-2214558 (Counterclockwise)

Preceding gene: 126447127

Following gene: 126446350

Centisome position: 94.2

GC content: 73.37

Gene sequence:

>1566_bases
GTGGCAGATATTGACCGCCGCCGCAAGGCGCGCAAAAGCGAACGGGTTCAAGCGCGGCTCGCGCGCAGCCGCGTCGCGCA
GCCATTCGCGCGAGCCCGGGGCGACAGCGCCGCGCTGCGGTATTTCGTGTCCGCGCAAGATATTCAACGCGTGGCAGATA
TTGACCGCCGCCGCATGGCGCACGAAAGCGAACGGGTGCAAGCGCGGCCCGCGCGCAGCCGCGTCGCGCAGCCGCGCGTG
CGAGCCCTGGGCGGCAGCGCCGCACGGCGGCATTTCGTGTCCGCGCCGGCGTCACGCCAGCGTCATTCACCCCGCATCAT
GCGGCTTGCCGCGCACCCGCGCGCCGTTCGTCTTTCGCGCGGCGATCCGCGTGCGCGTTCCTTCTCCGTCCCTCCGCCCG
TATTCGCGTCGGTACGAAACTTGCGCGCGTCGATGCGCCTCGGCGGCGGCCGCGCAGGGTGCCGGCCGCCGCCGAGGCGT
TCATCAAGGAGAGACGCGATGCAACGACGATATCAGGGACGGCCGGTCGGCCGCGGTGGCGCGGTGGGCTGGCAGGAGCG
CAACGAGCGCGGCTTGCGCGGCGGCGAGCGCGGCATGCAGTACGACGACGAAGCGTTGCTGCGCCCGGACCTCGACGTCG
AAGGCGACTACCGGATGCTGGCCGAGGACATTGGCCCCGAGGATTGGGGCAGCGACTGGGCGGACTGGGACGATCGCAAC
CCGTACGACGAGCGTCGCCGCGGCTACGAAGGCGGGCGGCGCGAGCGCGAAGGCGGCCGTGGCCCGCAGCGGATGCGCGG
CGTCGGCGCGCAGGGCAACGTCGGCGAGGCGCGCGGCGGCTATGCGGGCCCGCGCGGCTATGGCGACGACGGCTGGTACC
AGGGCGGCGGCCGCGACGATGACGGCGATCTGCGGAAGTTCCGCGGCCAGTCCCGCCTCGTGGCGGGCAGCCGCTCGCCC
TATCGCGGCGGCGAGCGTGAGGAGCGCGCCGGCCCCGAGCCGTGGCGCGCCGGCGGCGAGCGCTCGGCCTACCGCGACGA
GCTGTGGTCGCCGTACCGCACGCGCGAATACGACCGCTCGCGCGACTATCGCGACCTGCTGCACGGCGGCGGCGGTCAGC
GCGAGATGCTGCACCGGCAGGGGCCGAAAGGCTACACGCGCTCGGACGAACGGATTCGCGAGGACATCTGCGAGCGGCTT
GCCTATGCGTTCGATCTCGACGTGAGCGACGTCAGCGTGGAGGTGAACGGCGGCCGCGTCGAGCTGCAAGGCACCGTGCC
CGAGCGCTGGATGAAGCACGAGATCGAGGACATCGCGGATAACTGCATGTGCGTGCGCGACGTCGACAACCGCGTGCGCG
TGCTGCCGCGCGAGCGCGGCGAGACCACGGGCACCGCGGGCATGGCCGCGCCGCCCGAGGGGCAGCCGATGCGGCCCGAA
CACCGGACCTCGACGATGGCGGGCGGTGCCGGCGGCGCGGGCGGGCAATCGCCGAGCGGATCGGTCGCGGGCGGACAGCC
GTCGGGCGCGCTGTCGGGCACGGGCGGCCACGATCCGCGCCATTGA

Upstream 100 bases:

>100_bases
GACGCGTGTGCTTTCGCGACGACGCTGTTGCGTGCGACTCGACGCGAAGCGAAGCCTCGCGCCGCGCCGCGCATCCGCGC
CCGCGCAAGATATTCAACGC

Downstream 100 bases:

>100_bases
CGCGGCGGCGAACGCACGGGTATCCGCCGATGCATCCGACTGACGACCGCGCGCGTGCCGCGCAGCCCGCGCGCGCCGGC
GTAGGCGGGACGCGACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Osmotically Inducible Sensory Protein; Periplasmic Or Secreted Lipoprotein; Pe_pgrs; Osmotic Sensory Protein; Osmotically Inducible Protein Y

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRV
RALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRR
SSRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN
PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSP
YRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERL
AYAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE
HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH

Sequences:

>Translated_521_residues
MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRV
RALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRR
SSRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN
PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSP
YRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERL
AYAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE
HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH
>Mature_520_residues
ADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRVR
ALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRS
SRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRNP
YDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSPY
RGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLA
YAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPEH
RTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58064; Mature: 57933

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HESERVQARPARSRVAQPRVRALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSR
HHHHHHHHCHHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHCCCHHEEECCCCCEEEECC
GDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRSSRRDAMQRRYQGRPVGRGG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN
CCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDD
CHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGDLRKFRGQSRLVAGSRSPYRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRS
CHHHHHHCCCCCEEECCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHC
RDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLAYAFDLDVSDVSVEVNGGRV
CHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
ELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE
EEECCCHHHHHHHHHHHHHHCCEEEECCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCC
HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HESERVQARPARSRVAQPRVRALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSR
HHHHHHHHCHHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHCCCHHEEECCCCCEEEECC
GDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRSSRRDAMQRRYQGRPVGRGG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN
CCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDD
CHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGDLRKFRGQSRLVAGSRSPYRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRS
CHHHHHHCCCCCEEECCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHC
RDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLAYAFDLDVSDVSVEVNGGRV
CHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
ELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE
EEECCCHHHHHHHHHHHHHHCCEEEECCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCC
HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA