Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126445374
Identifier: 126445374
GI number: 126445374
Start: 427132
End: 428412
Strand: Reverse
Name: 126445374
Synonym: BURPS668_A0471
Alternate gene names: NA
Gene position: 428412-427132 (Counterclockwise)
Preceding gene: 126445539
Following gene: 126444411
Centisome position: 13.7
GC content: 67.76
Gene sequence:
>1281_bases ATGATTTTGACTCGGCGGGCACGCCGATTTCGACGCAAGTCATTGATCGGTCGAGAAAACGACTATCGAACGGCACAGGT TTGGTGCGTTTCGCGACGATCCACGTACAATCGTTCATTCACCGACATCGAACGACGCGCGGCGGCTGCGCCGCCGCCTC CCATCATGCAAACGCAGACCCATCCGCTGATCTCGCCGGCCGTCGGCACGGCGCGCCACATCACGAGTTTCCATTACGGC CCGCGCGGCGGGAAGAAGGTGTACATCCAGGCGTCGCTGCACGCGGACGAGCTGCCCGGCATGCTCGTCGCCACGCTGCT GCGCCGCAAGCTCGCGGCGCTCGAGGCGGCGGGCAGGCTGCGCGACGAGATCGTCGTCGTGCCGGTCGCGAACCCGATCG GCCTCGCGCAGCACGTGTTCGGCGATCATCTCGGCCGCTTCGAGCTCGGCTCGATGCAGAACTTCAACCGCAATTTCCAC GATCTCGCCGCGCTCGTGATTCCGCGCATCGAAGGGCGCCTCACGCACGACGCGGCCGCGAACCTCGCCGCCGTGCGCGG CGCGATGCGCGAGGCGCTTGCCGAGCAGAAGCCGCGCACCGAGCTCGAATCGCAGCGGCTCGCGCTGCAGCGGCTGTCGT ATGACGCAGACATCGTGCTCGATCTGCACTGCGACTGCGACGCGGTGATGCACATCTACACGAATCCGGACCTGTGGGAC GACGTCGAGCCGCTGTCGCGCTATCTGGGCGCGAAGGCGTCGCTGCTCGCGCTGAACTCGGTCGGCAATCCGTTCGACGA AATCCACAGCTTCTGCTGGTCCGAGCTGCGCGGCCGCTTCGGCGAACGTCATCCGATTCCGAACGGCACGATCTCGGTGA CGGTCGAGCTGCGCAGCGAGCGCGACGTGTCGTACGAGCTCGCCGAGCACGACGCGCAGGCGCTCGTCGAATACCTGACG CTGCGCGGCGCGATCGACGGCACGCCCGCGCCGCAGCCGCCGCTCGAATTCGCGGCCACGCCGCTCGCGGGCACCGATCC GCTCGTCGCGCCGGTGTCGGGCGTGATCGTGTTCCACACGCCGGTCGGCGTATGGATCGAGGCGGGCCAGGACGTGGCCG ACATCGTCGATCCGCTGACCGATCGCGTCGTCACGTTGAAGAGCAGCGTGTCCGGCGTGCTGTATGCGCGGCAGATCGCG CGCTTCGCGACGGCCGGCATGGAAGTCGCGCGGATCGCCGGCGCGACGCCGATCCGCACCGGATCGCTGCTGTCGGCTTG A
Upstream 100 bases:
>100_bases CGATCCTCGGCCGAGCCGCAGCCGCCGCGCGCCGCGCGGCGAAAAAAAATCGACGTCCCACACATGCCGCGGCGAACAGT GTATCGATTAAAAAATCGTC
Downstream 100 bases:
>100_bases GCGGCCGGCTGCGTTGGCGGCCCGTTGCAGGCCGCGGCGGGGCGTTACGGACTGCGGCCGGTCGTGGCGGACCATGGCGG GCCGCGCGGCTCGTGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Deacylase; Arginine Catabolism Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MILTRRARRFRRKSLIGRENDYRTAQVWCVSRRSTYNRSFTDIERRAAAAPPPPIMQTQTHPLISPAVGTARHITSFHYG PRGGKKVYIQASLHADELPGMLVATLLRRKLAALEAAGRLRDEIVVVPVANPIGLAQHVFGDHLGRFELGSMQNFNRNFH DLAALVIPRIEGRLTHDAAANLAAVRGAMREALAEQKPRTELESQRLALQRLSYDADIVLDLHCDCDAVMHIYTNPDLWD DVEPLSRYLGAKASLLALNSVGNPFDEIHSFCWSELRGRFGERHPIPNGTISVTVELRSERDVSYELAEHDAQALVEYLT LRGAIDGTPAPQPPLEFAATPLAGTDPLVAPVSGVIVFHTPVGVWIEAGQDVADIVDPLTDRVVTLKSSVSGVLYARQIA RFATAGMEVARIAGATPIRTGSLLSA
Sequences:
>Translated_426_residues MILTRRARRFRRKSLIGRENDYRTAQVWCVSRRSTYNRSFTDIERRAAAAPPPPIMQTQTHPLISPAVGTARHITSFHYG PRGGKKVYIQASLHADELPGMLVATLLRRKLAALEAAGRLRDEIVVVPVANPIGLAQHVFGDHLGRFELGSMQNFNRNFH DLAALVIPRIEGRLTHDAAANLAAVRGAMREALAEQKPRTELESQRLALQRLSYDADIVLDLHCDCDAVMHIYTNPDLWD DVEPLSRYLGAKASLLALNSVGNPFDEIHSFCWSELRGRFGERHPIPNGTISVTVELRSERDVSYELAEHDAQALVEYLT LRGAIDGTPAPQPPLEFAATPLAGTDPLVAPVSGVIVFHTPVGVWIEAGQDVADIVDPLTDRVVTLKSSVSGVLYARQIA RFATAGMEVARIAGATPIRTGSLLSA >Mature_426_residues MILTRRARRFRRKSLIGRENDYRTAQVWCVSRRSTYNRSFTDIERRAAAAPPPPIMQTQTHPLISPAVGTARHITSFHYG PRGGKKVYIQASLHADELPGMLVATLLRRKLAALEAAGRLRDEIVVVPVANPIGLAQHVFGDHLGRFELGSMQNFNRNFH DLAALVIPRIEGRLTHDAAANLAAVRGAMREALAEQKPRTELESQRLALQRLSYDADIVLDLHCDCDAVMHIYTNPDLWD DVEPLSRYLGAKASLLALNSVGNPFDEIHSFCWSELRGRFGERHPIPNGTISVTVELRSERDVSYELAEHDAQALVEYLT LRGAIDGTPAPQPPLEFAATPLAGTDPLVAPVSGVIVFHTPVGVWIEAGQDVADIVDPLTDRVVTLKSSVSGVLYARQIA RFATAGMEVARIAGATPIRTGSLLSA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46755; Mature: 46755
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTRRARRFRRKSLIGRENDYRTAQVWCVSRRSTYNRSFTDIERRAAAAPPPPIMQTQT CCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC HPLISPAVGTARHITSFHYGPRGGKKVYIQASLHADELPGMLVATLLRRKLAALEAAGRL CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHCC RDEIVVVPVANPIGLAQHVFGDHLGRFELGSMQNFNRNFHDLAALVIPRIEGRLTHDAAA CCCEEEEECCCCHHHHHHHHHHCCCCEECCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHH NLAAVRGAMREALAEQKPRTELESQRLALQRLSYDADIVLDLHCDCDAVMHIYTNPDLWD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCC DVEPLSRYLGAKASLLALNSVGNPFDEIHSFCWSELRGRFGERHPIPNGTISVTVELRSE CHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC RDVSYELAEHDAQALVEYLTLRGAIDGTPAPQPPLEFAATPLAGTDPLVAPVSGVIVFHT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCEEEEEC PVGVWIEAGQDVADIVDPLTDRVVTLKSSVSGVLYARQIARFATAGMEVARIAGATPIRT CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC GSLLSA CCCCCC >Mature Secondary Structure MILTRRARRFRRKSLIGRENDYRTAQVWCVSRRSTYNRSFTDIERRAAAAPPPPIMQTQT CCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC HPLISPAVGTARHITSFHYGPRGGKKVYIQASLHADELPGMLVATLLRRKLAALEAAGRL CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHCC RDEIVVVPVANPIGLAQHVFGDHLGRFELGSMQNFNRNFHDLAALVIPRIEGRLTHDAAA CCCEEEEECCCCHHHHHHHHHHCCCCEECCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHH NLAAVRGAMREALAEQKPRTELESQRLALQRLSYDADIVLDLHCDCDAVMHIYTNPDLWD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCC DVEPLSRYLGAKASLLALNSVGNPFDEIHSFCWSELRGRFGERHPIPNGTISVTVELRSE CHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC RDVSYELAEHDAQALVEYLTLRGAIDGTPAPQPPLEFAATPLAGTDPLVAPVSGVIVFHT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCEEEEEC PVGVWIEAGQDVADIVDPLTDRVVTLKSSVSGVLYARQIARFATAGMEVARIAGATPIRT CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCC GSLLSA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA