Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126444782
Identifier: 126444782
GI number: 126444782
Start: 1001401
End: 1002489
Strand: Reverse
Name: 126444782
Synonym: BURPS668_A1036
Alternate gene names: NA
Gene position: 1002489-1001401 (Counterclockwise)
Preceding gene: 126442496
Following gene: 126443437
Centisome position: 32.05
GC content: 62.9
Gene sequence:
>1089_bases ATGCATCACGCACCGGCCGGCATCGCCGCCGTTCTTTTCGTCGCCGCAAGCACTGTCTGCGCACAGGTCCCGGCCGGCTA TCCGGGTAACTACCAACACGTGATCGACGCGGCGAAGCAGGAAGGCAAGCTCGTCGTCTACTCGACCACCGACACCTCGC TCGTGCGCCCGCTCATCAAGGATTTCGAAAGCCTGTACGGCGTGAAGGTCGAATACAACGACATGAACAGCACCGAGCTT TACAACCGCTACGTCAGTGAAAGCGCCGCGAAAAGCGCGAGCGCCGACGTGCTGTGGAACTCGGCGATGGACCTGCAGGT GAAGCTCGTCAACGACGGGCTGACGGCCGCGTACGATTCGCCCGAGACGCCGCACATGCCGCAGTGGGCGCAATACCAGA AGCAGGCGTACGGCACGACCTACGAGCCGCTCGCGATCGTCTACAACAAGCGGCTGATTGCCGAGCGCGACGTGCCGAAG ACGCGCGCCGACCTGATCAGGCTGCTGCAGTCGCAGCCCGAGAGGTTCAAGGGCAAGGTGACGACTTACGACATCGAGAA ATCCGGCGTCGGCTTCAACTATCTGACGCAGGACGCGCACGTGAACGAAAAGGTCACCTGGGAACTCGTGCGCGCGATCG GCGCGACGGGCCCGAAGCTGCAGTCGAGCACGGGCGCGATGATGGAGCGCATCTCGTCGGGCGAGAACCTCGTCGGCTAC AACATCATCGGCTCATATGCGTACGCGAAGGCGAAGAAGGACAAGTCGATCGGCTACGTGCTGCCGAAGGACTACACGCT CGTCGTGAGCCGCCTCGTCGCGATCTCGAAGCAGGCGCAGCATCCGAACGCGGCGAAGCTGTGGGTCGACTATCTGCTGT CCCGGCGCGGCCAGACGCTGATCGCGAACCAGGCGAACCTGTATTCGATCCGCGCGGACGTATCGGGCGAAACGTCGATG ACGAGCCTCGCCAAGGAACTCGGCGATTCGCTCAAGCCGATCCAGATCGGCTCGGGCCTGCTCGTCTATCTCGATCAGTC CAAGCGCCTCGCGTTCCTCAAGCAGTGGCAGCAGGCGCTCAAGCGCTGA
Upstream 100 bases:
>100_bases AAAAGAAAGCGATCGTGACGAAAAATGAAAGCACGCTGAAAGTGCGCACCGCTTACCATCCGCGTCACTCGAACCGAACA AGACGCAACTGGAGGAAGAC
Downstream 100 bases:
>100_bases GCCCGCGCGCGTGACGGTTCGCGCGGCGGCCGCCGCGCGAACCCCTTGCCTTCATTTTTCCCATCACTGACGCGGCCCGC GGGCCGCAAGGGCGAACTCA
Product: Fe3+ ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MHHAPAGIAAVLFVAASTVCAQVPAGYPGNYQHVIDAAKQEGKLVVYSTTDTSLVRPLIKDFESLYGVKVEYNDMNSTEL YNRYVSESAAKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYNKRLIAERDVPK TRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHVNEKVTWELVRAIGATGPKLQSSTGAMMERISSGENLVGY NIIGSYAYAKAKKDKSIGYVLPKDYTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSM TSLAKELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR
Sequences:
>Translated_362_residues MHHAPAGIAAVLFVAASTVCAQVPAGYPGNYQHVIDAAKQEGKLVVYSTTDTSLVRPLIKDFESLYGVKVEYNDMNSTEL YNRYVSESAAKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYNKRLIAERDVPK TRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHVNEKVTWELVRAIGATGPKLQSSTGAMMERISSGENLVGY NIIGSYAYAKAKKDKSIGYVLPKDYTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSM TSLAKELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR >Mature_362_residues MHHAPAGIAAVLFVAASTVCAQVPAGYPGNYQHVIDAAKQEGKLVVYSTTDTSLVRPLIKDFESLYGVKVEYNDMNSTEL YNRYVSESAAKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYNKRLIAERDVPK TRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHVNEKVTWELVRAIGATGPKLQSSTGAMMERISSGENLVGY NIIGSYAYAKAKKDKSIGYVLPKDYTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSM TSLAKELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 40027; Mature: 40027
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHAPAGIAAVLFVAASTVCAQVPAGYPGNYQHVIDAAKQEGKLVVYSTTDTSLVRPLIK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHH DFESLYGVKVEYNDMNSTELYNRYVSESAAKSASADVLWNSAMDLQVKLVNDGLTAAYDS HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHEECCCCEEEEEEECCCCEECCCC PETPHMPQWAQYQKQAYGTTYEPLAIVYNKRLIAERDVPKTRADLIRLLQSQPERFKGKV CCCCCCCHHHHHHHHHCCCCCCCHHEEECCHHHHCCCCCHHHHHHHHHHHCCCHHHCCCE TTYDIEKSGVGFNYLTQDAHVNEKVTWELVRAIGATGPKLQSSTGAMMERISSGENLVGY EEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE NIIGSYAYAKAKKDKSIGYVLPKDYTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTL HHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE IANQANLYSIRADVSGETSMTSLAKELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQAL EECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHH KR CC >Mature Secondary Structure MHHAPAGIAAVLFVAASTVCAQVPAGYPGNYQHVIDAAKQEGKLVVYSTTDTSLVRPLIK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHH DFESLYGVKVEYNDMNSTELYNRYVSESAAKSASADVLWNSAMDLQVKLVNDGLTAAYDS HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHEECCCCEEEEEEECCCCEECCCC PETPHMPQWAQYQKQAYGTTYEPLAIVYNKRLIAERDVPKTRADLIRLLQSQPERFKGKV CCCCCCCHHHHHHHHHCCCCCCCHHEEECCHHHHCCCCCHHHHHHHHHHHCCCHHHCCCE TTYDIEKSGVGFNYLTQDAHVNEKVTWELVRAIGATGPKLQSSTGAMMERISSGENLVGY EEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE NIIGSYAYAKAKKDKSIGYVLPKDYTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTL HHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE IANQANLYSIRADVSGETSMTSLAKELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQAL EECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHH KR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]