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The map label for this gene is ycbX [H]

Identifier: 126442496

GI number: 126442496

Start: 1005552

End: 1006421

Strand: Reverse

Name: ycbX [H]

Synonym: BURPS668_A1041

Alternate gene names: 126442496

Gene position: 1006421-1005552 (Counterclockwise)

Preceding gene: 126445407

Following gene: 126444782

Centisome position: 32.18

GC content: 70.46

Gene sequence:

>870_bases
ATGCCAGTCATCAGCGAACTTTTCGTCTATCCGATCAAGTCCTGCGCGGGCATCGCGACGGTTCGCGCGCAATTGCTCGT
CACGGGCCTCGAATACGATCGCAACTGGATGGTCACCGATCAGACAGGCGCGATGCTCACGCAGCGCACGCACCCGCGAC
TCGCGCTCGTGCGCACGGCGATCGGCGAGCGCGAGCTCGTCGTCACCGCGGCAGGCATGCCCGAGTTGCGCACGCCGCTC
GCGGCGTCGGCGCTCGCGGGGGCCGAGCGGCTCGCCGCAACCGTCTGGCGCGACACCGTGAGCGCGCTCGACACCGGCGC
GCATGCGGCGCGCTGGTTCAGCGAGTTCCTCGGCGCGCCCGCGCGGCTCGCGCGCTTCGCGCCCGACGCGCGGCGCGTGG
TGGGCGCGAAGTGGACGGGCCCGTTCACGTCGTACGCGCAATTCGCGGACGGCTTTCCGCTCCTCGTCGTCGGCCAGTCG
TCGCTCGACGACCTGAACGTGCGGCTGCGCCGCAAGGGCGCGAGCGCGGTGCCGATGAACCGCTTCCGCCCGAACGTCGT
GCTGGCGGGCCTCGACGCATACGAGGAAGACTACGTCGACTACCTCGACGTGCAGACGGGCGGCGGCGGCGTGCGCCTGA
GCCTCGTCAAGCTGTGCACGCGCTGCCCGGTGCCGACGATCGACCAGCGCACGGGCGCGCCGGACCCGGCGTGGCCGAAC
GAGCCGACCGACACGATGAGCCTCTATCGCGGCAGCAAGCAGTTCGGCGGCGCGCTGACGTTCGGCAAGAATGCGATCGT
CTTGAACGGCGACGGCGCGTTCCTGGAAGTCGGGCAATCGGTCGATGCGGAGATCGCGTTCGGCGAGTGA

Upstream 100 bases:

>100_bases
GCGCTCGGTCGCAGGCGGTTGCGAACGTGGCCAATCTGGCAGAATCACGGTTCCGCCGCAGTTTTTTTAATCCGTACCGG
TCCCCGGGCCCGAGCGCGCC

Downstream 100 bases:

>100_bases
CTCGCGCCAATCGCGCGTGACGCGCGCGTATGTCCGACACACCGCTTGCGCCGCCACTCGCACCGCGCGACGCTGCCGTC
ATTGACGCCCCGCCGCCGGC

Product: mosc domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDQTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPL
AASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQS
SLDDLNVRLRRKGASAVPMNRFRPNVVLAGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE

Sequences:

>Translated_289_residues
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDQTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPL
AASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQS
SLDDLNVRLRRKGASAVPMNRFRPNVVLAGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
>Mature_288_residues
PVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDQTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLA
ASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSS
LDDLNVRLRRKGASAVPMNRFRPNVVLAGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPNE
PTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=294, Percent_Identity=31.6326530612245, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI31542713, Length=255, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI157388923, Length=250, Percent_Identity=30, Blast_Score=116, Evalue=2e-26,
Organism=Escherichia coli, GI1787179, Length=282, Percent_Identity=30.1418439716312, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25147498, Length=289, Percent_Identity=26.2975778546713, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17540702, Length=302, Percent_Identity=27.1523178807947, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71990971, Length=245, Percent_Identity=26.530612244898, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17561286, Length=300, Percent_Identity=24.3333333333333, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17647607, Length=265, Percent_Identity=29.4339622641509, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 31089; Mature: 30958

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDQTGAMLTQRTHPRLALVRTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHH
IGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAP
CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMN
HHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHEEECCCCCCCHH
RFRPNVVLAGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
HCCCCEEEEECCHHHHHCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
CCCHHHHHHCCCHHHCCEEEECCCEEEECCCCCEEEECCCCCCEEECCC
>Mature Secondary Structure 
PVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDQTGAMLTQRTHPRLALVRTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHH
IGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAP
CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMN
HHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHEEECCCCCCCHH
RFRPNVVLAGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
HCCCCEEEEECCHHHHHCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
CCCHHHHHHCCCHHHCCEEEECCCEEEECCCCCEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]