Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is wzxE [H]
Identifier: 126209012
GI number: 126209012
Start: 1770236
End: 1771486
Strand: Reverse
Name: wzxE [H]
Synonym: APL_1548
Alternate gene names: 126209012
Gene position: 1771486-1770236 (Counterclockwise)
Preceding gene: 126209013
Following gene: 126209009
Centisome position: 77.89
GC content: 41.73
Gene sequence:
>1251_bases ATGCAATCATTGAGCAAAACGTCCGTTTGGACGGCAAGCGCCACCGCATTTAAAATCGCTATTAGTTTAATACTGGTAAA GCTGTTTGCCTTGCAATTCGGGTTGGAAGGCTTGGGGCAAGCGGCGAATTTTATGACGCTGATTACCGTGCTGGGTGCAT TTGCCGGCGGCGGTATTTTTCACGGTGTGACGAAATATGTAGCGGAATTTGAACACGAGCCGCAAAAATTACACAGATTA TTTGTTACGGCGAGTCGGATTGTATTGAGCTTTTCCGCCGTACTGGCGGTCGTTTTTATCTTCTTTTCCGCAAAAATCAG CGAATGGATTTTCTATTCCGTAGATTATCAAACGGTAATTATTGCGACGGGGATTATCCAATTCGGCATTGCGAGCAGTA ACTATCTATTGGCTATTTTAAGGGGGTACCGACAAGCGAAAGCCAATGCGATAAGTCAGAGTATCGGTATATTTCTTGCG GTTAGCGTTTTTATAATCGGATTATATGTGTGCGATTATTCGGGGGCGTTAATCGGGCCGGCGGCTATATCGGCGTTAGC TTGGTTACCCGCCGGTTATTTTCTAAAACCGAAAGGTTCCGTATTTCGTTTTAGGGAGAAAGGCGAGTTTGATTGGCAAT ATGCGCGAAATTTATTTAAGTTCAGCGGTATGGTATTCGCAACGGCAATCACGTTACCGCTCGCTTATATTTTGTTGCGC GATTTACTGATGGAATCTCATTCGCTTGAGCAGGTCGGCTTATGGCAAGGGGTAAGTAAAATTTCCGATGCGTATTTGCA ACTGATTACGGCGGTTTTCTCGGTATATTTATTACCGACGTTTGCCAAATTAACCCAAAAATCTGAAATTAAACGCGAGT TGATTAAAGCGGTTAAATTTGTCGGAATTCTTGCAATCGCTACCGGTTTATCGGTATTTGTTTTAAAGCGTGAAATCATT CTGACCTTATATTCCGAACAATTTTTACCGATGGAATCATTGTTTATTTGGCAATTAATCGGAGATGTTTTTAAAGTGGT TGCTTACGTATTCGGCTATTTAGTCGTGGCGAAAGCCTCGTTAAAGCTGTATGTGTTGGCGGAAGTTTGTCAATTAACGT TATTGATTACTATCGGGCATTGGTTGATTCCGTTAAATGGTGCGGAAGGTGCGGTACAAACCTATTTATTGACTTATTTT TGTTATTTCTTTATCTGCTTATTTGCGTTTCGTCGCTACCTAAAAAATTAA
Upstream 100 bases:
>100_bases CTTCGGAAAGCGAACGCTTGGTGCGTTTACCGCTATTTTATAATTTACAACCGCAAGAATCGGATAAAATTATTCGGGTT ATATTGGAATTTCTACATCA
Downstream 100 bases:
>100_bases AACCTCAAAGATTTCCTTTGAGGTTTTTTTGTTTATAAAATTTATAAAGAAACCGATACGTTTTCTTTTACACGGCAGCT ACACGCCAGTACATAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MQSLSKTSVWTASATAFKIAISLILVKLFALQFGLEGLGQAANFMTLITVLGAFAGGGIFHGVTKYVAEFEHEPQKLHRL FVTASRIVLSFSAVLAVVFIFFSAKISEWIFYSVDYQTVIIATGIIQFGIASSNYLLAILRGYRQAKANAISQSIGIFLA VSVFIIGLYVCDYSGALIGPAAISALAWLPAGYFLKPKGSVFRFREKGEFDWQYARNLFKFSGMVFATAITLPLAYILLR DLLMESHSLEQVGLWQGVSKISDAYLQLITAVFSVYLLPTFAKLTQKSEIKRELIKAVKFVGILAIATGLSVFVLKREII LTLYSEQFLPMESLFIWQLIGDVFKVVAYVFGYLVVAKASLKLYVLAEVCQLTLLITIGHWLIPLNGAEGAVQTYLLTYF CYFFICLFAFRRYLKN
Sequences:
>Translated_416_residues MQSLSKTSVWTASATAFKIAISLILVKLFALQFGLEGLGQAANFMTLITVLGAFAGGGIFHGVTKYVAEFEHEPQKLHRL FVTASRIVLSFSAVLAVVFIFFSAKISEWIFYSVDYQTVIIATGIIQFGIASSNYLLAILRGYRQAKANAISQSIGIFLA VSVFIIGLYVCDYSGALIGPAAISALAWLPAGYFLKPKGSVFRFREKGEFDWQYARNLFKFSGMVFATAITLPLAYILLR DLLMESHSLEQVGLWQGVSKISDAYLQLITAVFSVYLLPTFAKLTQKSEIKRELIKAVKFVGILAIATGLSVFVLKREII LTLYSEQFLPMESLFIWQLIGDVFKVVAYVFGYLVVAKASLKLYVLAEVCQLTLLITIGHWLIPLNGAEGAVQTYLLTYF CYFFICLFAFRRYLKN >Mature_416_residues MQSLSKTSVWTASATAFKIAISLILVKLFALQFGLEGLGQAANFMTLITVLGAFAGGGIFHGVTKYVAEFEHEPQKLHRL FVTASRIVLSFSAVLAVVFIFFSAKISEWIFYSVDYQTVIIATGIIQFGIASSNYLLAILRGYRQAKANAISQSIGIFLA VSVFIIGLYVCDYSGALIGPAAISALAWLPAGYFLKPKGSVFRFREKGEFDWQYARNLFKFSGMVFATAITLPLAYILLR DLLMESHSLEQVGLWQGVSKISDAYLQLITAVFSVYLLPTFAKLTQKSEIKRELIKAVKFVGILAIATGLSVFVLKREII LTLYSEQFLPMESLFIWQLIGDVFKVVAYVFGYLVVAKASLKLYVLAEVCQLTLLITIGHWLIPLNGAEGAVQTYLLTYF CYFFICLFAFRRYLKN
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=408, Percent_Identity=49.0196078431373, Blast_Score=379, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 46322; Mature: 46322
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLSKTSVWTASATAFKIAISLILVKLFALQFGLEGLGQAANFMTLITVLGAFAGGGIF CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH HGVTKYVAEFEHEPQKLHRLFVTASRIVLSFSAVLAVVFIFFSAKISEWIFYSVDYQTVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH IATGIIQFGIASSNYLLAILRGYRQAKANAISQSIGIFLAVSVFIIGLYVCDYSGALIGP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECH AAISALAWLPAGYFLKPKGSVFRFREKGEFDWQYARNLFKFSGMVFATAITLPLAYILLR HHHHHHHHHCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLMESHSLEQVGLWQGVSKISDAYLQLITAVFSVYLLPTFAKLTQKSEIKRELIKAVKF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGILAIATGLSVFVLKREIILTLYSEQFLPMESLFIWQLIGDVFKVVAYVFGYLVVAKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKLYVLAEVCQLTLLITIGHWLIPLNGAEGAVQTYLLTYFCYFFICLFAFRRYLKN HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQSLSKTSVWTASATAFKIAISLILVKLFALQFGLEGLGQAANFMTLITVLGAFAGGGIF CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH HGVTKYVAEFEHEPQKLHRLFVTASRIVLSFSAVLAVVFIFFSAKISEWIFYSVDYQTVI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH IATGIIQFGIASSNYLLAILRGYRQAKANAISQSIGIFLAVSVFIIGLYVCDYSGALIGP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECH AAISALAWLPAGYFLKPKGSVFRFREKGEFDWQYARNLFKFSGMVFATAITLPLAYILLR HHHHHHHHHCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLMESHSLEQVGLWQGVSKISDAYLQLITAVFSVYLLPTFAKLTQKSEIKRELIKAVKF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGILAIATGLSVFVLKREIILTLYSEQFLPMESLFIWQLIGDVFKVVAYVFGYLVVAKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKLYVLAEVCQLTLLITIGHWLIPLNGAEGAVQTYLLTYFCYFFICLFAFRRYLKN HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]