Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is 126207997

Identifier: 126207997

GI number: 126207997

Start: 582220

End: 582747

Strand: Direct

Name: 126207997

Synonym: APL_0513

Alternate gene names: NA

Gene position: 582220-582747 (Clockwise)

Preceding gene: 126207996

Following gene: 126207998

Centisome position: 25.6

GC content: 42.05

Gene sequence:

>528_bases
ATGAGCGTAAAAATTGATGGAATGGCGGAGATTTCCGCCAATATCGCCAAACTGACCAAGCAAAAGCTCCCCCAAGCCGC
TAAAAAGTCGCTTAATACTTTAGCTCGGCGTGCGATGAAAGGAGCTACACAAACGGTAGCAAAAGAGATTGGCGTACCGC
ACAAAACCATTCGCAACCGAGCCAAATTAACCAAACCTGCGGAAAAAACACGGCTGGAGGCACGGATAAAGGTTATTCGT
TCCAATATGCCAGCTATTCGCCTGTTTGAAAACCGTTCTACTAAAATGTGGGTCGGACGTGGTGGCATTGTAGTAGGTAA
ATATGCGATTAAACGAGGATTTAAACAAACGCTAAAAAATGGTCGAACACACCTAATGCAGCGTCAAGGTAAAGCTCGTT
ACAGCATTGATGTAGTAAAAATTCCACTTTCACAACCATTAACACAGGCTTTCTCTCATGAATTGAAGGATTACCAACAA
GATATTCAAAAAGAACTGACTAAGCAATTAAGTGAGGTATTTAAATGA

Upstream 100 bases:

>100_bases
AGCCACGAACAGGCGATGAAGCGGTGCGAGAAGGTAAAGTGTTCTTCGTGAAATCATATTACCACCAAGACAATCTGCTT
ATTCTTCGTTTGGAGTAGTA

Downstream 100 bases:

>100_bases
TTATTCATAGCCAAATTCGAGAAGAAATTCTCGAATGTTTAAAACAAGCCTTACCCAATGAAATTAACTGGTATAACGGC
AGACCATCCTTTATCGATAT

Product: putative phage tail component

Products: NA

Alternate protein names: Phage Tail Component; Prophage Minor Tail Protein Z; Tail Component Of Prophage; Prophage Minor Tail Z Family Protein; Bacteriophage Tail Protein; Minor Tail Protein Z Of Prophage; Gifsy-1 Prophagei VmtZ

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIR
SNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQ
DIQKELTKQLSEVFK

Sequences:

>Translated_175_residues
MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIR
SNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQ
DIQKELTKQLSEVFK
>Mature_174_residues
SVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIRS
NMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQD
IQKELTKQLSEVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19794; Mature: 19663

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKLTKPAEKTRLEARIKVIRSNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKN
HHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHH
GRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQDIQKELTKQLSEVFK
HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKLTKPAEKTRLEARIKVIRSNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKN
HHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHH
GRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQDIQKELTKQLSEVFK
HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA