Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207995
Identifier: 126207995
GI number: 126207995
Start: 581599
End: 581922
Strand: Direct
Name: 126207995
Synonym: APL_0511
Alternate gene names: NA
Gene position: 581599-581922 (Clockwise)
Preceding gene: 126207994
Following gene: 126207996
Centisome position: 25.57
GC content: 46.91
Gene sequence:
>324_bases ATGGCTAAAAACTATATTCAGGATGGTAATACCGTCCGCTTAACCGCAGCAAAAGCAATTGTTTCAGGGGATGTCTTAGT GAGCGGCGATCTTATTGCGATCGCTGTTACCGATGCTGCAAAAAATGATGCGGTTGTCGGTTTAACGACAGGTGTGTTCA ACGTGAAAGCCAAACAAGCGGACGACATCAAGCAAGGTGCAGTGCTCTACTGGTCTGAAACCGAAGGGGCAACCTTAACG GCAGGTGGTAATAAACGCCTAGGTATTGCGTGGCGAGACAGTGGCACATCTTCTGATGAAGTAGATGTGAAAATCAATGT GTAG
Upstream 100 bases:
>100_bases GGTATTGTGAAAGTCACAAACCAGTAACTAGCAAATAACTTATAGACCGTACTTTAATCAATAAGGTACGGTTTTTTATT ATCTGAAAAAGGAAAACCTT
Downstream 100 bases:
>100_bases CCCTTTTGAACAGGCAATGAAACAAGCAGATCAAGTCATTATGGCAACGATGATGAGTGAATGGCAGCTCCAAGGGCAAC CTTACCCTGCCGTTTACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MAKNYIQDGNTVRLTAAKAIVSGDVLVSGDLIAIAVTDAAKNDAVVGLTTGVFNVKAKQADDIKQGAVLYWSETEGATLT AGGNKRLGIAWRDSGTSSDEVDVKINV
Sequences:
>Translated_107_residues MAKNYIQDGNTVRLTAAKAIVSGDVLVSGDLIAIAVTDAAKNDAVVGLTTGVFNVKAKQADDIKQGAVLYWSETEGATLT AGGNKRLGIAWRDSGTSSDEVDVKINV >Mature_106_residues AKNYIQDGNTVRLTAAKAIVSGDVLVSGDLIAIAVTDAAKNDAVVGLTTGVFNVKAKQADDIKQGAVLYWSETEGATLTA GGNKRLGIAWRDSGTSSDEVDVKINV
Specific function: Unknown
COG id: COG5471
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11096; Mature: 10964
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNYIQDGNTVRLTAAKAIVSGDVLVSGDLIAIAVTDAAKNDAVVGLTTGVFNVKAKQA CCCCCCCCCCEEEEEEEEEEEECCEEEECCEEEEEEECCCCCCEEEEEECCEEEEECCCC DDIKQGAVLYWSETEGATLTAGGNKRLGIAWRDSGTSSDEVDVKINV CCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure AKNYIQDGNTVRLTAAKAIVSGDVLVSGDLIAIAVTDAAKNDAVVGLTTGVFNVKAKQA CCCCCCCCCEEEEEEEEEEEECCEEEECCEEEEEEECCCCCCEEEEEECCEEEEECCCC DDIKQGAVLYWSETEGATLTAGGNKRLGIAWRDSGTSSDEVDVKINV CCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA