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The map label for this gene is glpQ [H]

Identifier: 126207862

GI number: 126207862

Start: 429865

End: 430953

Strand: Reverse

Name: glpQ [H]

Synonym: APL_0378

Alternate gene names: 126207862

Gene position: 430953-429865 (Counterclockwise)

Preceding gene: 126207870

Following gene: 126207861

Centisome position: 18.95

GC content: 40.22

Gene sequence:

>1089_bases
ATGAAAACAATCAAAGCATTAGCTGTCAGCCTTATTACTACGGCGGTATTAGCCGGTTGTTCTAATACGCAACCTGTTGA
GCCGGTTAAATCCGACAAGTTGATTATCGCTCACCGTGGTGCCAGCGGCTACCTACCGGAGCATACGCTTGAATCCAAAG
CGCTTGCTTTCGCTCAACAAGCGGATTATTTAGAGCAAGATCTTGCGATGACAAAGGACAACCGTTTAATTGTTATTCAC
GACCATTTCTTAGACGGCTTAACCGATGTGGCGAAAAAATTCCCGAAACGTGCGCGTAAGGACGGACGTTTCTATGTGGC
GGATTTCACCTTAAAAGAAATCCAAACGCTTGAAATGACGGAAAATTTCAAAACCGAAAACGGCCAACAAGTACAGGTTT
ATCCGAATCGTTTCCCGATGTGGAAATCACATTTCAGAATTCACACTTTCGAAGATGAAATCGAATTTATTCAAGGCTTA
GAAAAATCAACCGGTAAACAAATCGGCATCTATCCGGAAATCAAAGCACCTTGGCTACATCACCAAGAAGGTAAAGATAT
TGCATTAGAAACCTTAAAAGTACTGAAAAAATACGGCTATGACCAAAAATCGGACAAAGTTTATTTACAAACTTTCGATT
TTAACGAGTTAAAACGTATTAAAACCGAATTATTGCCGAAACTCGGTATGGACGTAAAACTCGTTCAATTAGTCGCTTAT
ACCGATTGGCATGAAACCGAAGAAAAAGATGCTTCGGGTAAATGGGTAAACTATAACTACGATTGGATGTTTAAAGACGG
TGCAATGGCTGAAGTGGCTAAATATGCCGACGGTGTAGGCCCAGGTTGGTATATGTTGGTTGATGACAAAAATTCAAAAT
TAGGTGATATCAAATATACGCCGATGGTGAAAGATATTGCGAAAACGAAAATGGAATTACATCCTTATACAGTACGTAAA
GATGCGCTTCCGGAATTTTTTAGCGATGTAAATCAAATGTACGATGCGTTATTAAATAAAGCGGGAGCAACCGGCGTGTT
TACCGACTTCCCGGATACCGGCGTACAATTTATTAAAGGAACAAAATAA

Upstream 100 bases:

>100_bases
TGTGGCATAGATCACAAATTTACATAAATCATCTTTTATATTTGTACTTTTCGGATAACCTTGAGCCGGCTTTTTAAGCA
ATCATCATGAGGAGAAATCT

Downstream 100 bases:

>100_bases
TCTCAATTTTGAGCGAAAATGAAGAATAAATTTGTGAATCGACCATGTTTTGATTGAATATGTTGAAATACCCTCATAAA
AATGTGAGTAGATTCACAAA

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase; Immunoglobulin D-binding protein; IgD-binding protein; Surface-exposed lipoprotein D; Protein D [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKTIKALAVSLITTAVLAGCSNTQPVEPVKSDKLIIAHRGASGYLPEHTLESKALAFAQQADYLEQDLAMTKDNRLIVIH
DHFLDGLTDVAKKFPKRARKDGRFYVADFTLKEIQTLEMTENFKTENGQQVQVYPNRFPMWKSHFRIHTFEDEIEFIQGL
EKSTGKQIGIYPEIKAPWLHHQEGKDIALETLKVLKKYGYDQKSDKVYLQTFDFNELKRIKTELLPKLGMDVKLVQLVAY
TDWHETEEKDASGKWVNYNYDWMFKDGAMAEVAKYADGVGPGWYMLVDDKNSKLGDIKYTPMVKDIAKTKMELHPYTVRK
DALPEFFSDVNQMYDALLNKAGATGVFTDFPDTGVQFIKGTK

Sequences:

>Translated_362_residues
MKTIKALAVSLITTAVLAGCSNTQPVEPVKSDKLIIAHRGASGYLPEHTLESKALAFAQQADYLEQDLAMTKDNRLIVIH
DHFLDGLTDVAKKFPKRARKDGRFYVADFTLKEIQTLEMTENFKTENGQQVQVYPNRFPMWKSHFRIHTFEDEIEFIQGL
EKSTGKQIGIYPEIKAPWLHHQEGKDIALETLKVLKKYGYDQKSDKVYLQTFDFNELKRIKTELLPKLGMDVKLVQLVAY
TDWHETEEKDASGKWVNYNYDWMFKDGAMAEVAKYADGVGPGWYMLVDDKNSKLGDIKYTPMVKDIAKTKMELHPYTVRK
DALPEFFSDVNQMYDALLNKAGATGVFTDFPDTGVQFIKGTK
>Mature_362_residues
MKTIKALAVSLITTAVLAGCSNTQPVEPVKSDKLIIAHRGASGYLPEHTLESKALAFAQQADYLEQDLAMTKDNRLIVIH
DHFLDGLTDVAKKFPKRARKDGRFYVADFTLKEIQTLEMTENFKTENGQQVQVYPNRFPMWKSHFRIHTFEDEIEFIQGL
EKSTGKQIGIYPEIKAPWLHHQEGKDIALETLKVLKKYGYDQKSDKVYLQTFDFNELKRIKTELLPKLGMDVKLVQLVAY
TDWHETEEKDASGKWVNYNYDWMFKDGAMAEVAKYADGVGPGWYMLVDDKNSKLGDIKYTPMVKDIAKTKMELHPYTVRK
DALPEFFSDVNQMYDALLNKAGATGVFTDFPDTGVQFIKGTK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols. Has a specific affinity for human immunoglobulin D myeloma protein [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=356, Percent_Identity=63.4831460674157, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41416; Mature: 41416

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKALAVSLITTAVLAGCSNTQPVEPVKSDKLIIAHRGASGYLPEHTLESKALAFAQQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ADYLEQDLAMTKDNRLIVIHDHFLDGLTDVAKKFPKRARKDGRFYVADFTLKEIQTLEMT
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH
ENFKTENGQQVQVYPNRFPMWKSHFRIHTFEDEIEFIQGLEKSTGKQIGIYPEIKAPWLH
HCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
HQEGKDIALETLKVLKKYGYDQKSDKVYLQTFDFNELKRIKTELLPKLGMDVKLVQLVAY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEHHHHH
TDWHETEEKDASGKWVNYNYDWMFKDGAMAEVAKYADGVGPGWYMLVDDKNSKLGDIKYT
CCCCCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEECC
PMVKDIAKTKMELHPYTVRKDALPEFFSDVNQMYDALLNKAGATGVFTDFPDTGVQFIKG
HHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC
TK
CC
>Mature Secondary Structure
MKTIKALAVSLITTAVLAGCSNTQPVEPVKSDKLIIAHRGASGYLPEHTLESKALAFAQQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ADYLEQDLAMTKDNRLIVIHDHFLDGLTDVAKKFPKRARKDGRFYVADFTLKEIQTLEMT
HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH
ENFKTENGQQVQVYPNRFPMWKSHFRIHTFEDEIEFIQGLEKSTGKQIGIYPEIKAPWLH
HCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
HQEGKDIALETLKVLKKYGYDQKSDKVYLQTFDFNELKRIKTELLPKLGMDVKLVQLVAY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEHHHHH
TDWHETEEKDASGKWVNYNYDWMFKDGAMAEVAKYADGVGPGWYMLVDDKNSKLGDIKYT
CCCCCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEECC
PMVKDIAKTKMELHPYTVRKDALPEFFSDVNQMYDALLNKAGATGVFTDFPDTGVQFIKG
HHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC
TK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 1987023; 8104899; 7822043; 1548059 [H]