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The map label for this gene is yccT [C]

Identifier: 126207857

GI number: 126207857

Start: 422376

End: 422978

Strand: Direct

Name: yccT [C]

Synonym: APL_0373

Alternate gene names: 126207857

Gene position: 422376-422978 (Clockwise)

Preceding gene: 126207854

Following gene: 126207858

Centisome position: 18.57

GC content: 40.63

Gene sequence:

>603_bases
ATGAAATTAACCAAAATGGCGGTTACGGTTGCAACATTAGCGGTCAGTGCGTTTTCGGTTGCAGGCACTTTAACCGCATC
GGATAGCGTAGAATTATTGGCTTTTGACGGACAGAAAGTGGCGAGAGGTACGGCGGGATTATCGATTGACGGCAACGTGC
ACCAAGTCGTAGTCAGTGTAAGCGATATTGTGGACGGAAGCTATTTCTCCATTGATCCGATTATTCTTACTTTTAACGGT
ACCGATGAAGACGCCAAAATTGTGACTCCGAAATTTACGTCTAATTTTACGGTAGATAAGTTTAAGAAAGAATTAAACTT
TAAAATTGAAACCGCATCGGGCAAAGAAATCTCATATAAGCGCGATTTCTTAAAAGGAGAAGGTTTCGCACCGAATTCTC
GAGTTGAAGATAATCTCTCCAAATATAACGCAAGTAAAGCGGTCGCTTCCGTTCCGGCTTTTGCAAATGCGGCGTTGGAA
GCTAAAGGACAAATGGTGATTGAAACCAATAATGTTAAAGAAGAGCAGTTGCAAGTTTTATTTAAAAAAGCGGATAAAGA
AACGCAAAAACGTTTCTTGGAATGGGCTAAAAAACAACAGTAA

Upstream 100 bases:

>100_bases
CAAATTCATCGCTTTGATAATAAATTTATTTCTATTTTTGAGAAATTAGCATAGCATAAGCTATAGATATTCATATTGAT
TTAAGTTAAGGAGCTTCTTT

Downstream 100 bases:

>100_bases
CGTTTCCCCTTTTTACGGATTAAACCTCAACTTCGGTTGAGGTTTTTTTGTCTGTTTTCGTCCGTAAAATTTGAAATGCG
TCACATTTTTAACCGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKLTKMAVTVATLAVSAFSVAGTLTASDSVELLAFDGQKVARGTAGLSIDGNVHQVVVSVSDIVDGSYFSIDPIILTFNG
TDEDAKIVTPKFTSNFTVDKFKKELNFKIETASGKEISYKRDFLKGEGFAPNSRVEDNLSKYNASKAVASVPAFANAALE
AKGQMVIETNNVKEEQLQVLFKKADKETQKRFLEWAKKQQ

Sequences:

>Translated_200_residues
MKLTKMAVTVATLAVSAFSVAGTLTASDSVELLAFDGQKVARGTAGLSIDGNVHQVVVSVSDIVDGSYFSIDPIILTFNG
TDEDAKIVTPKFTSNFTVDKFKKELNFKIETASGKEISYKRDFLKGEGFAPNSRVEDNLSKYNASKAVASVPAFANAALE
AKGQMVIETNNVKEEQLQVLFKKADKETQKRFLEWAKKQQ
>Mature_200_residues
MKLTKMAVTVATLAVSAFSVAGTLTASDSVELLAFDGQKVARGTAGLSIDGNVHQVVVSVSDIVDGSYFSIDPIILTFNG
TDEDAKIVTPKFTSNFTVDKFKKELNFKIETASGKEISYKRDFLKGEGFAPNSRVEDNLSKYNASKAVASVPAFANAALE
AKGQMVIETNNVKEEQLQVLFKKADKETQKRFLEWAKKQQ

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 21782; Mature: 21782

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKMAVTVATLAVSAFSVAGTLTASDSVELLAFDGQKVARGTAGLSIDGNVHQVVVSV
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHCCCCCEEECCCCEEEEEEH
SDIVDGSYFSIDPIILTFNGTDEDAKIVTPKFTSNFTVDKFKKELNFKIETASGKEISYK
HHHCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHCCEEEEECCCCEECHH
RDFLKGEGFAPNSRVEDNLSKYNASKAVASVPAFANAALEAKGQMVIETNNVKEEQLQVL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCHHHHHHH
FKKADKETQKRFLEWAKKQQ
HHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLTKMAVTVATLAVSAFSVAGTLTASDSVELLAFDGQKVARGTAGLSIDGNVHQVVVSV
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHCCCCCEEECCCCEEEEEEH
SDIVDGSYFSIDPIILTFNGTDEDAKIVTPKFTSNFTVDKFKKELNFKIETASGKEISYK
HHHCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHCCEEEEECCCCEECHH
RDFLKGEGFAPNSRVEDNLSKYNASKAVASVPAFANAALEAKGQMVIETNNVKEEQLQVL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCHHHHHHH
FKKADKETQKRFLEWAKKQQ
HHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA