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The map label for this gene is ssa1 [H]

Identifier: 126207848

GI number: 126207848

Start: 404823

End: 407621

Strand: Reverse

Name: ssa1 [H]

Synonym: APL_0364

Alternate gene names: 126207848

Gene position: 407621-404823 (Counterclockwise)

Preceding gene: 126207849

Following gene: 126207847

Centisome position: 17.92

GC content: 36.94

Gene sequence:

>2799_bases
ATGCTTGAAAAATATTATTTTAATAAAAGCTGTATTGCAATCGCCATTTCCACTTTCTTATCTACTAGCGTAGCCTACGC
AGACTCTTTGGAATCGCCTCATTCAGGCATTAAGCTTTCGGATGAGATCAGTTCTAAATATAGTGGTAAGGGAGTGAAAT
TAGGTGTACTCGATGGTGGGTTTGTTGTTCAACATCCACTGAATTCATCAAAACTTCACCCATCTAGTTTTAAACTAACT
TCACCAGATGGAAAAGTGCTAACCTATGATCCGAGTTACTTGCAATTTGAAGTAAAACCCGTCGAACAGAATGGAAAAAA
AGATCTAACAGCTCTATTTGAAACTCATGGCTTAGGGGTATCCGGCGTTATTTCAGCGAAAGCTTCCAAAAAAGATGGCT
TTAAAGGTGGTGTAGCTAAAGATGCTGAGATTCACATTGCAACAAATACTCCAAACCGAAGCTTAGCTGAATTAATTGCT
GAAGCACAGCAATCAGAAAGTGAGGACGAAGGTCAGGGGGATTCAAAAAACCAAAAACCTAATTTTGATGAGCTTGCCAA
AGATGATTTATTACTCACTAAAGAAAAAAGGCTCTCATTTGAACGCTTAGAGTGGGCAACCGCTTTAAATAAGCTTGTCG
AACGAAATCTATTCGCCATTAATAATAGTTGGAATCTTGATCCTATCAGCGATAATATCGCCGATTTCGATAAACTTTAT
CATTCTCTATCAACAGATAAACAAAATTCACTGCTTCAAGCAGTCTTAAATGCCAAAAGGAAAAATACGTTATTAGTCTT
TGCGGCAGGAAATGAGAGTAAAAAGCAAGTTGGTGTGATGGCAATGTTACCTCGTTACCTACCCGAACTGGAAAAACACT
ACCTATCAGTTGTGGCTGTAGATAATAAAAATAATCTTGCAGAATACTCTAACCATTGTGGTGTGAGTAAAAATTGGTGC
GTTGCCGCTCCCGGAAATCTTGCGATCCTCAATGCAATTCCAGATAATAAACTTAAACCGCAATATAGTCTTGATAAAGA
AGAAGGAACGTCCCTTGCTACACCTGTAGTCACGGGAGCTTTAGCTATCTTAAAAGAACGTTTTAACTATCTAGTCCCAA
CGCAAATTCGTGATACTTTATTAACCACTGCAACCGATCTTGGTGAAAAAGGGGTAGATGATAAATATGGCTGGGGAGTG
ATTAATATAGCCAAGGCGATTAATGGCCCGAGTCAATTTTTAAATGATGAAACGGTTAATGTGACACGAGATGATCGCTG
GAAAAACGATTTCTCAAGTAAATTTAAATTTACCAAGCAAGGTGAAAAATCATTAGATTTAGCCGGTAAAAATAATATTG
CCCGAATTGATGTTGAACAAGGCAGACTCAACTTAAGCGGAATGACTCAATCCAAACAAGTGAAAAATAATGCCCATTTA
GGTGTAAATCAAACTGAAATTAGGCAAGGTTATATGGCTACTGAAAATAGCCAATTAACCTTATTGGATAGTAATGGTTT
AATTGGTAAAGATAAAGCAATTATTCAGCTAAATGGTTCGTTAAAAATTGCTGATAAATTAACGGAAAATAGTAAACAAG
GTAGTATTTCAGCTACTGTTGTAAAACTTCATGATAAGGCGAGCTATCAAGGTGGGTTCACAAAACTAATTGATAATAAA
AATTTAGCCAATAAAGGCTTAATGCAAGATCTCTATTTTAAACAGTCTGAAATTATTGCGAAAGTCAATTCAAATAAAGC
CTTTACTGATCCTAATGCCAGTGATAATGCCAAGTCTGGACTGAGCCTATTAAATCAACTTAGAACCAGCTCATTTGCAT
ATCGTCAGGGGGTATATAATGACTGGCTACAATCTGCATTAGAGCAAAAGAAATTAGGTCAGCTACATTATGCGGTTTCT
AATCATATTTATGCTGATGCTTTAGCATTATTACGTCATCAAAATGCAAAACAACTTAGCCATGTTCAGCATAATTTATT
TACTGCAGCCTATTCACCACAAAAAACGTCAGTTTGGCTTGAGCATAGTGGCCAAAAACATTCTAAAGTGGCAATTAAAC
AGAACTCATCTACTCTCGGTTTGAGCCATAAGTTCAATGATAACGCATTATTGAGTGCAACATTAATGCGAAAAAATCAT
CATATGGACAAAGATTTTGCTCATGCAGACCTAAAACAGACAAGCTTAAATATTGGATTACGTTATCCTTTAGCCGATCA
TTGGTTTAGTGAGTTAGCACTACAATTTGGGCAGCAGAAATACAACCAACGCCGTTGGTACAAAAAATCTCAGCTCGGTC
AGGCTCAAAACAAAGGGCATCATATGGGGGGAGAAATTCGTGTCGGTTATCAATTTATGCCACAAACTTGGATAATTGAA
CCAAGCCTAGGGGTTCAGTTCATTCAAACGAGAATGAAAGCTCTCAATGAAAAAGGTGAACTTGCAATAAATACCACGGC
TCTTCACTATAACGATATTAATCTCACACCGAGTGTGAAATTAAAATACACCGTTAAATTTGAGCAAGGCAGCATTTCAC
CTTATGTTGGTTTGAACTACTTACATCGAGTAAAAGGAAAAGAAAGTAAAATTACCAGCCAACTCAATGGCTACCCATTA
CAAAGCTATGCGACACAAAAACGTAACCATGCTTTAAATCTTGAAGCCGGCATGCAGTTCCAATATAAAAATTGGTTCGT
TTCTGCGAATGTTGATTATGATCGCATAAAATCAACGAATGCTTTTGGTTGGAAAACCAATATCGGCTTAACTTTCTAA

Upstream 100 bases:

>100_bases
ATTATCCATAAAAAACTTGAGGTAAATCAAAAAAGATGAGAACTATTTGCAATAATAGACATCGTAAGTATAATCCCATT
TTTTTATAAGGAGACTATAA

Downstream 100 bases:

>100_bases
CTAATTATTCCAAACCTAAAAGTGGCACAGGCTTGCTTTGCTTGTGCCTATATCCTTTTAACTCTAATTATAGTATTTAC
ATTCAAACAATCTTATGAAG

Product: serotype-specific antigen 1 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 932; Mature: 932

Protein sequence:

>932_residues
MLEKYYFNKSCIAIAISTFLSTSVAYADSLESPHSGIKLSDEISSKYSGKGVKLGVLDGGFVVQHPLNSSKLHPSSFKLT
SPDGKVLTYDPSYLQFEVKPVEQNGKKDLTALFETHGLGVSGVISAKASKKDGFKGGVAKDAEIHIATNTPNRSLAELIA
EAQQSESEDEGQGDSKNQKPNFDELAKDDLLLTKEKRLSFERLEWATALNKLVERNLFAINNSWNLDPISDNIADFDKLY
HSLSTDKQNSLLQAVLNAKRKNTLLVFAAGNESKKQVGVMAMLPRYLPELEKHYLSVVAVDNKNNLAEYSNHCGVSKNWC
VAAPGNLAILNAIPDNKLKPQYSLDKEEGTSLATPVVTGALAILKERFNYLVPTQIRDTLLTTATDLGEKGVDDKYGWGV
INIAKAINGPSQFLNDETVNVTRDDRWKNDFSSKFKFTKQGEKSLDLAGKNNIARIDVEQGRLNLSGMTQSKQVKNNAHL
GVNQTEIRQGYMATENSQLTLLDSNGLIGKDKAIIQLNGSLKIADKLTENSKQGSISATVVKLHDKASYQGGFTKLIDNK
NLANKGLMQDLYFKQSEIIAKVNSNKAFTDPNASDNAKSGLSLLNQLRTSSFAYRQGVYNDWLQSALEQKKLGQLHYAVS
NHIYADALALLRHQNAKQLSHVQHNLFTAAYSPQKTSVWLEHSGQKHSKVAIKQNSSTLGLSHKFNDNALLSATLMRKNH
HMDKDFAHADLKQTSLNIGLRYPLADHWFSELALQFGQQKYNQRRWYKKSQLGQAQNKGHHMGGEIRVGYQFMPQTWIIE
PSLGVQFIQTRMKALNEKGELAINTTALHYNDINLTPSVKLKYTVKFEQGSISPYVGLNYLHRVKGKESKITSQLNGYPL
QSYATQKRNHALNLEAGMQFQYKNWFVSANVDYDRIKSTNAFGWKTNIGLTF

Sequences:

>Translated_932_residues
MLEKYYFNKSCIAIAISTFLSTSVAYADSLESPHSGIKLSDEISSKYSGKGVKLGVLDGGFVVQHPLNSSKLHPSSFKLT
SPDGKVLTYDPSYLQFEVKPVEQNGKKDLTALFETHGLGVSGVISAKASKKDGFKGGVAKDAEIHIATNTPNRSLAELIA
EAQQSESEDEGQGDSKNQKPNFDELAKDDLLLTKEKRLSFERLEWATALNKLVERNLFAINNSWNLDPISDNIADFDKLY
HSLSTDKQNSLLQAVLNAKRKNTLLVFAAGNESKKQVGVMAMLPRYLPELEKHYLSVVAVDNKNNLAEYSNHCGVSKNWC
VAAPGNLAILNAIPDNKLKPQYSLDKEEGTSLATPVVTGALAILKERFNYLVPTQIRDTLLTTATDLGEKGVDDKYGWGV
INIAKAINGPSQFLNDETVNVTRDDRWKNDFSSKFKFTKQGEKSLDLAGKNNIARIDVEQGRLNLSGMTQSKQVKNNAHL
GVNQTEIRQGYMATENSQLTLLDSNGLIGKDKAIIQLNGSLKIADKLTENSKQGSISATVVKLHDKASYQGGFTKLIDNK
NLANKGLMQDLYFKQSEIIAKVNSNKAFTDPNASDNAKSGLSLLNQLRTSSFAYRQGVYNDWLQSALEQKKLGQLHYAVS
NHIYADALALLRHQNAKQLSHVQHNLFTAAYSPQKTSVWLEHSGQKHSKVAIKQNSSTLGLSHKFNDNALLSATLMRKNH
HMDKDFAHADLKQTSLNIGLRYPLADHWFSELALQFGQQKYNQRRWYKKSQLGQAQNKGHHMGGEIRVGYQFMPQTWIIE
PSLGVQFIQTRMKALNEKGELAINTTALHYNDINLTPSVKLKYTVKFEQGSISPYVGLNYLHRVKGKESKITSQLNGYPL
QSYATQKRNHALNLEAGMQFQYKNWFVSANVDYDRIKSTNAFGWKTNIGLTF
>Mature_932_residues
MLEKYYFNKSCIAIAISTFLSTSVAYADSLESPHSGIKLSDEISSKYSGKGVKLGVLDGGFVVQHPLNSSKLHPSSFKLT
SPDGKVLTYDPSYLQFEVKPVEQNGKKDLTALFETHGLGVSGVISAKASKKDGFKGGVAKDAEIHIATNTPNRSLAELIA
EAQQSESEDEGQGDSKNQKPNFDELAKDDLLLTKEKRLSFERLEWATALNKLVERNLFAINNSWNLDPISDNIADFDKLY
HSLSTDKQNSLLQAVLNAKRKNTLLVFAAGNESKKQVGVMAMLPRYLPELEKHYLSVVAVDNKNNLAEYSNHCGVSKNWC
VAAPGNLAILNAIPDNKLKPQYSLDKEEGTSLATPVVTGALAILKERFNYLVPTQIRDTLLTTATDLGEKGVDDKYGWGV
INIAKAINGPSQFLNDETVNVTRDDRWKNDFSSKFKFTKQGEKSLDLAGKNNIARIDVEQGRLNLSGMTQSKQVKNNAHL
GVNQTEIRQGYMATENSQLTLLDSNGLIGKDKAIIQLNGSLKIADKLTENSKQGSISATVVKLHDKASYQGGFTKLIDNK
NLANKGLMQDLYFKQSEIIAKVNSNKAFTDPNASDNAKSGLSLLNQLRTSSFAYRQGVYNDWLQSALEQKKLGQLHYAVS
NHIYADALALLRHQNAKQLSHVQHNLFTAAYSPQKTSVWLEHSGQKHSKVAIKQNSSTLGLSHKFNDNALLSATLMRKNH
HMDKDFAHADLKQTSLNIGLRYPLADHWFSELALQFGQQKYNQRRWYKKSQLGQAQNKGHHMGGEIRVGYQFMPQTWIIE
PSLGVQFIQTRMKALNEKGELAINTTALHYNDINLTPSVKLKYTVKFEQGSISPYVGLNYLHRVKGKESKITSQLNGYPL
QSYATQKRNHALNLEAGMQFQYKNWFVSANVDYDRIKSTNAFGWKTNIGLTF

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase S8 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 103812; Mature: 103812

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKYYFNKSCIAIAISTFLSTSVAYADSLESPHSGIKLSDEISSKYSGKGVKLGVLDGG
CCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHCCCCCCEEEEEECCC
FVVQHPLNSSKLHPSSFKLTSPDGKVLTYDPSYLQFEVKPVEQNGKKDLTALFETHGLGV
EEEECCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCCCHHHHHHHHHCCCCE
SGVISAKASKKDGFKGGVAKDAEIHIATNTPNRSLAELIAEAQQSESEDEGQGDSKNQKP
EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NFDELAKDDLLLTKEKRLSFERLEWATALNKLVERNLFAINNSWNLDPISDNIADFDKLY
CHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHH
HSLSTDKQNSLLQAVLNAKRKNTLLVFAAGNESKKQVGVMAMLPRYLPELEKHYLSVVAV
HHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEE
DNKNNLAEYSNHCGVSKNWCVAAPGNLAILNAIPDNKLKPQYSLDKEEGTSLATPVVTGA
CCCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHH
LAILKERFNYLVPTQIRDTLLTTATDLGEKGVDDKYGWGVINIAKAINGPSQFLNDETVN
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHCCCCCEE
VTRDDRWKNDFSSKFKFTKQGEKSLDLAGKNNIARIDVEQGRLNLSGMTQSKQVKNNAHL
CCCCCCCCCCHHHHCEECCCCCCCEECCCCCCEEEEEECCCEEEECCCCCHHHHCCCCCC
GVNQTEIRQGYMATENSQLTLLDSNGLIGKDKAIIQLNGSLKIADKLTENSKQGSISATV
CCCHHHHHCCCEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEHHHHCCCCCCCEEEEE
VKLHDKASYQGGFTKLIDNKNLANKGLMQDLYFKQSEIIAKVNSNKAFTDPNASDNAKSG
EEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
LSLLNQLRTSSFAYRQGVYNDWLQSALEQKKLGQLHYAVSNHIYADALALLRHQNAKQLS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HVQHNLFTAAYSPQKTSVWLEHSGQKHSKVAIKQNSSTLGLSHKFNDNALLSATLMRKNH
HHHHHHEEEECCCCCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEHHHHHHHCC
HMDKDFAHADLKQTSLNIGLRYPLADHWFSELALQFGQQKYNQRRWYKKSQLGQAQNKGH
CCCCHHHHCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
HMGGEIRVGYQFMPQTWIIEPSLGVQFIQTRMKALNEKGELAINTTALHYNDINLTPSVK
CCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEE
LKYTVKFEQGSISPYVGLNYLHRVKGKESKITSQLNGYPLQSYATQKRNHALNLEAGMQF
EEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCEE
QYKNWFVSANVDYDRIKSTNAFGWKTNIGLTF
EEEEEEEECCCCHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLEKYYFNKSCIAIAISTFLSTSVAYADSLESPHSGIKLSDEISSKYSGKGVKLGVLDGG
CCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHCCCCCCEEEEEECCC
FVVQHPLNSSKLHPSSFKLTSPDGKVLTYDPSYLQFEVKPVEQNGKKDLTALFETHGLGV
EEEECCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCCCHHHHHHHHHCCCCE
SGVISAKASKKDGFKGGVAKDAEIHIATNTPNRSLAELIAEAQQSESEDEGQGDSKNQKP
EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NFDELAKDDLLLTKEKRLSFERLEWATALNKLVERNLFAINNSWNLDPISDNIADFDKLY
CHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHH
HSLSTDKQNSLLQAVLNAKRKNTLLVFAAGNESKKQVGVMAMLPRYLPELEKHYLSVVAV
HHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEE
DNKNNLAEYSNHCGVSKNWCVAAPGNLAILNAIPDNKLKPQYSLDKEEGTSLATPVVTGA
CCCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHHHH
LAILKERFNYLVPTQIRDTLLTTATDLGEKGVDDKYGWGVINIAKAINGPSQFLNDETVN
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHCCCCCEE
VTRDDRWKNDFSSKFKFTKQGEKSLDLAGKNNIARIDVEQGRLNLSGMTQSKQVKNNAHL
CCCCCCCCCCHHHHCEECCCCCCCEECCCCCCEEEEEECCCEEEECCCCCHHHHCCCCCC
GVNQTEIRQGYMATENSQLTLLDSNGLIGKDKAIIQLNGSLKIADKLTENSKQGSISATV
CCCHHHHHCCCEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEHHHHCCCCCCCEEEEE
VKLHDKASYQGGFTKLIDNKNLANKGLMQDLYFKQSEIIAKVNSNKAFTDPNASDNAKSG
EEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
LSLLNQLRTSSFAYRQGVYNDWLQSALEQKKLGQLHYAVSNHIYADALALLRHQNAKQLS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HVQHNLFTAAYSPQKTSVWLEHSGQKHSKVAIKQNSSTLGLSHKFNDNALLSATLMRKNH
HHHHHHEEEECCCCCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEHHHHHHHCC
HMDKDFAHADLKQTSLNIGLRYPLADHWFSELALQFGQQKYNQRRWYKKSQLGQAQNKGH
CCCCHHHHCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
HMGGEIRVGYQFMPQTWIIEPSLGVQFIQTRMKALNEKGELAINTTALHYNDINLTPSVK
CCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEE
LKYTVKFEQGSISPYVGLNYLHRVKGKESKITSQLNGYPLQSYATQKRNHALNLEAGMQF
EEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCEE
QYKNWFVSANVDYDRIKSTNAFGWKTNIGLTF
EEEEEEEECCCCHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1840576 [H]