Click here to switch to the map view.

The map label for this gene is ybjX [C]

Identifier: 126207847

GI number: 126207847

Start: 403856

End: 404728

Strand: Reverse

Name: ybjX [C]

Synonym: APL_0363

Alternate gene names: 126207847

Gene position: 404728-403856 (Counterclockwise)

Preceding gene: 126207848

Following gene: 126207845

Centisome position: 17.79

GC content: 28.06

Gene sequence:

>873_bases
ATGAAGAAGTTCTTTCATTTCCCCAAATTTAGTGAAGCATTTCCAAATGAAAAAAGACCATCTAAGCTACTAAGAGAATA
TTTTCGTTATAGCTTCCGCAAGGTATGGTGTTCAACCCAATGTATTCAATTGACAAATTACTTAAACAATTCACCTTTAT
GGGCAGAATTATTTAATCAAAACTTATATCGGGTTAATACACTTTTAGATACTTACTGTGATAAAACTTTTAATAAAAAA
CAAAGATTAAAAGCTATCAAAGAAAACTTTACGCGTTTTGAAAATTTATTCAGAATACATTTTTGCAATCAACTTGTGAC
ACAGCAAGAGGTTTGTATTGCCAAATTAAGTGATGAACTGAATTTATATCTTAGCATTAATCAAATCGATCCCCTAGAAG
GTTTCTTTTCATTAAATATTAAAAATAATCAAAAAGAACATATCTACGATGCTTCTTTTACCTTACTAGAGGAAAATAAA
ATTCTAATTTCCTCAATACAAGGACCTAACAGTAAATCTGCACAGGATCTTATAAAATCAGCTACTAAACAATTATATGG
TATTCGCCCTATGTTTATGCTGATTTATATATTTAAACTAATTGCTGAGAAATTTAATTTAGAATTACTCGGAATCCCTC
ATAAAAGACAAGCAAAATATCGCTGGAATGATCACTCCAGATTATTATTTAATTACGATATTTTTTGGAAAGACAATAAT
GCTATTCTTACAAAAAATGATTATTGGTCATTGAGTAATAACATTGAGAGAAAACCATTAAATATCATACCGAGCAAAAA
ACGTTCTATGTATAAGAAACGTTACCAATTGCTCGATGATATTAAAGAAAAAATAAACTTAATGTTTTATTAA

Upstream 100 bases:

>100_bases
TTCTAACTAATTATTCCAAACCTAAAAGTGGCACAGGCTTGCTTTGCTTGTGCCTATATCCTTTTAACTCTAATTATAGT
ATTTACATTCAAACAATCTT

Downstream 100 bases:

>100_bases
TATACATATAATAATCTAGACAAATTTATTTCTCTTACGTAAAAGACCAATCTTTTATTAGATTGGTCTTTTACGTAAAT
ATTATGCAATACTGTTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKKFFHFPKFSEAFPNEKRPSKLLREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQNLYRVNTLLDTYCDKTFNKK
QRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAKLSDELNLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLLEENK
ILISSIQGPNSKSAQDLIKSATKQLYGIRPMFMLIYIFKLIAEKFNLELLGIPHKRQAKYRWNDHSRLLFNYDIFWKDNN
AILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKINLMFY

Sequences:

>Translated_290_residues
MKKFFHFPKFSEAFPNEKRPSKLLREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQNLYRVNTLLDTYCDKTFNKK
QRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAKLSDELNLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLLEENK
ILISSIQGPNSKSAQDLIKSATKQLYGIRPMFMLIYIFKLIAEKFNLELLGIPHKRQAKYRWNDHSRLLFNYDIFWKDNN
AILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKINLMFY
>Mature_290_residues
MKKFFHFPKFSEAFPNEKRPSKLLREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQNLYRVNTLLDTYCDKTFNKK
QRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAKLSDELNLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLLEENK
ILISSIQGPNSKSAQDLIKSATKQLYGIRPMFMLIYIFKLIAEKFNLELLGIPHKRQAKYRWNDHSRLLFNYDIFWKDNN
AILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKINLMFY

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787103, Length=234, Percent_Identity=22.6495726495727, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 35006; Mature: 35006

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFHFPKFSEAFPNEKRPSKLLREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQ
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NLYRVNTLLDTYCDKTFNKKQRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAKLSDEL
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
NLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLLEENKILISSIQGPNSKSAQDLIKS
EEEEEECCCCCCCCEEEEEECCCCCHHEECCCEEEEECCEEEEEECCCCCCCCHHHHHHH
ATKQLYGIRPMFMLIYIFKLIAEKFNLELLGIPHKRQAKYRWNDHSRLLFNYDIFWKDNN
HHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC
AILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKINLMFY
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEECC
>Mature Secondary Structure
MKKFFHFPKFSEAFPNEKRPSKLLREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQ
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NLYRVNTLLDTYCDKTFNKKQRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAKLSDEL
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
NLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLLEENKILISSIQGPNSKSAQDLIKS
EEEEEECCCCCCCCEEEEEECCCCCHHEECCCEEEEECCEEEEEECCCCCCCCHHHHHHH
ATKQLYGIRPMFMLIYIFKLIAEKFNLELLGIPHKRQAKYRWNDHSRLLFNYDIFWKDNN
HHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC
AILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKINLMFY
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]