| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yhbJ [C]
Identifier: 126207818
GI number: 126207818
Start: 370507
End: 371367
Strand: Reverse
Name: yhbJ [C]
Synonym: APL_0334
Alternate gene names: 126207818
Gene position: 371367-370507 (Counterclockwise)
Preceding gene: 126207819
Following gene: 126207817
Centisome position: 16.33
GC content: 42.04
Gene sequence:
>861_bases ATGGAATTAATCATTATCAGCGGGCGCTCCGGTTCCGGTAAATCCGTTGCGCTCAGAGCATTAGAAGATGTGGGATATTA TTGTGTGGATAATCTCCCGCTTCCGCTTATTCCGGAATTAGCCGGTTTCTTATCCAACTCAGGTCGTTCCGCCGTCGTCA GTCTTGATATTCGTAATATTCCCGAAAATCCCGAAAGCATTGAAGCCTTGTTGGAGCAATTATCAAAACTGACGATTCAA ACCAAAATCATCTTCTTGGATTGCGAACGCAATACGTTAATCCGTCGTTATAGCGACACGCGTCGTTTACATCCTTTATC AAACAAAGATCTCTCGTTAGAAAGTGCGATTGATTTGGAAAATACCTTGCTTGAGCCGCTCTATCAACAAGCTAACTATA TTATTGATACGACCAATATTTCCTCGCACGAATTGGCGGAAAATCTGCGCGGCATTTTACGAGGCTCAACCGATAAAGCG CTTAAAATCGTCTTTGAGTCTTTCGGCTTTAAATACGGTTTACCTGCGGATGCCGATTATGTATTTGACGTACGTTTCTT ACCGAATCCGCATTGGAATCCGGAATTACGCCCGATGACAGGCTTAGAACAACCGGTTATCGACTTCCTTGAACGTCAAA CCGAAGTACATAATTTTATCTATCAAACTCGTAATTACTTAGAAATGTGGTTGCCGATGTTAGAAAAAAATAACCGTAGC TATCTCACGATTGCGATCGGCTGTACCGGCGGTAAGCATCGTTCGGTATTTATTGCCGAACAATTGGCGAAATATTTCCA AAGTCGAGATAAAGACGTACAAATTCGTCATCGCAGTTTAGAAAAACACCATAAGAAATAA
Upstream 100 bases:
>100_bases ACAGCTACGTTCCGCAAATAACGCCGAAGAAATCTGGCAATTATTGGTTTATGCGGATAACCAAATTCTTGAGCAAGAAT AATTGTTTTTGAGGAAACCT
Downstream 100 bases:
>100_bases GTTAATCTACCAAGCGGTCAAATTTAAATGGATTTTTACAAATTTATTTAAAAATATGACCGCTTATTATTTATAAACGA TCTTTATATGAAATCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MELIIISGRSGSGKSVALRALEDVGYYCVDNLPLPLIPELAGFLSNSGRSAVVSLDIRNIPENPESIEALLEQLSKLTIQ TKIIFLDCERNTLIRRYSDTRRLHPLSNKDLSLESAIDLENTLLEPLYQQANYIIDTTNISSHELAENLRGILRGSTDKA LKIVFESFGFKYGLPADADYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNFIYQTRNYLEMWLPMLEKNNRS YLTIAIGCTGGKHRSVFIAEQLAKYFQSRDKDVQIRHRSLEKHHKK
Sequences:
>Translated_286_residues MELIIISGRSGSGKSVALRALEDVGYYCVDNLPLPLIPELAGFLSNSGRSAVVSLDIRNIPENPESIEALLEQLSKLTIQ TKIIFLDCERNTLIRRYSDTRRLHPLSNKDLSLESAIDLENTLLEPLYQQANYIIDTTNISSHELAENLRGILRGSTDKA LKIVFESFGFKYGLPADADYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNFIYQTRNYLEMWLPMLEKNNRS YLTIAIGCTGGKHRSVFIAEQLAKYFQSRDKDVQIRHRSLEKHHKK >Mature_286_residues MELIIISGRSGSGKSVALRALEDVGYYCVDNLPLPLIPELAGFLSNSGRSAVVSLDIRNIPENPESIEALLEQLSKLTIQ TKIIFLDCERNTLIRRYSDTRRLHPLSNKDLSLESAIDLENTLLEPLYQQANYIIDTTNISSHELAENLRGILRGSTDKA LKIVFESFGFKYGLPADADYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNFIYQTRNYLEMWLPMLEKNNRS YLTIAIGCTGGKHRSVFIAEQLAKYFQSRDKDVQIRHRSLEKHHKK
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=282, Percent_Identity=68.7943262411348, Blast_Score=409, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y339_ACTP7 (B3H0H9)
Other databases:
- EMBL: CP001091 - RefSeq: YP_001968133.1 - ProteinModelPortal: B3H0H9 - GeneID: 6396955 - GenomeReviews: CP001091_GR - KEGG: apa:APP7_0339 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32804; Mature: 32804
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIIISGRSGSGKSVALRALEDVGYYCVDNLPLPLIPELAGFLSNSGRSAVVSLDIRNI CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC PENPESIEALLEQLSKLTIQTKIIFLDCERNTLIRRYSDTRRLHPLSNKDLSLESAIDLE CCCHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCHH NTLLEPLYQQANYIIDTTNISSHELAENLRGILRGSTDKALKIVFESFGFKYGLPADADY HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCE VFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNFIYQTRNYLEMWLPMLEKNNRS EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YLTIAIGCTGGKHRSVFIAEQLAKYFQSRDKDVQIRHRSLEKHHKK EEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MELIIISGRSGSGKSVALRALEDVGYYCVDNLPLPLIPELAGFLSNSGRSAVVSLDIRNI CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC PENPESIEALLEQLSKLTIQTKIIFLDCERNTLIRRYSDTRRLHPLSNKDLSLESAIDLE CCCHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCHH NTLLEPLYQQANYIIDTTNISSHELAENLRGILRGSTDKALKIVFESFGFKYGLPADADY HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCE VFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNFIYQTRNYLEMWLPMLEKNNRS EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YLTIAIGCTGGKHRSVFIAEQLAKYFQSRDKDVQIRHRSLEKHHKK EEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA