Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is tolA [C]
Identifier: 126207786
GI number: 126207786
Start: 334285
End: 335580
Strand: Direct
Name: tolA [C]
Synonym: APL_0302
Alternate gene names: 126207786
Gene position: 334285-335580 (Clockwise)
Preceding gene: 126207785
Following gene: 126207787
Centisome position: 14.7
GC content: 43.21
Gene sequence:
>1296_bases GTGAAATCTAAAAACGACAGACTGGAACTGGCGGTTATAGTTTCAATTCTATTACATGCATTGTTGATCGGATTGCTTAT ACTCGGTTCATTTTTTACGAAAACTACGTTGGAAGAAGCTGCCGGCGGTAGCGGTGGAACCGGAGAAGAATTTGAAGCAG TGATGGTTGATACCGGGCAGGTTGCTGCCGAGTATGGGCGTTTAAAATCCGATAAAAAGGGTAATGCTAAACCGAAGGTA GAGGAAAAAGAAGAGCCGAAACCGGAGGAAGTAGTAGAGGACGAGCCTACACCTCAAGAAATTGCCGAAGAACAGGCGAA AGAACAACAACGCATTGCAATGATTGAAGAGCAGAAAAAGCAAGAAGAGCAACGCAAAGAAGAACAGCGTAAAAAGGCTG AAGAAAAACGTCAGCAAGAGATTGAAAAGCAAGAACAACTTAAAAAAGAGCAAGCGGAAGAAGCTACACGTAAGAAAGCT GCCGAAGCCGCTCGTTTAAAAGCTGAAGCGGAAGCTAAGAATTTAGAAGCTGCGGCAAAAGCGGCGGAAGAAGAGAAAAA GGCAAAAGAAGCTCAGAAAAAACTTGAACAGCAAAAGAAACTTGAAGAGCAAAAACAAGCTGAGAAAGAAGCGAAATTAA AAGCTGAAAAAGAGGCTAAAGAAAAGGCTGAAAAAGAAGCTAAAGCTAAGGCTGAGAAAGAGGCTAAAGAAAAAGCGGAA AAAGAAGCGAAATTAAAAGCTGAAAAAGAGGCTAAAGAAAAGGCTGAAAAAGAAGCGAAACTAAAAGCTGAGAAAGATGC GAAGGCTAAAGCTGAGAAAGAAGCTAAAGCGAAGGCGGCGGCAGAAGCGAAAGCCAAAGCGGATGCGGCGGCTAAGGCTG CTCAAGCTAAGAATAACAAAGCGCTTGATGATTTCTTAAGCGGCGGCGATATTGGCGGCGGTTCCAGCAAGGGTGGCAAT AAAAATACGGCGGGTTCTCAAGGAAACGGTAATGCTAAGGGAATAGGAGACGGAAGAGGTACCGCCGATACGGGATATGC TCAGTTAATTAAGAAAAAATTAGCGCGAACCTATCGTGTAGATCCGAGTTTCAGCGGGCGTGAATGCCAAGTCAAGATCT TTATTGATCCGGCAGGTAATATTACTAACCACCAAGTATTATCGGGTCCTGACGACATTTGTCGTGCTGCAGTAACGGCG ATTACTTCGGCAAGAAATGTTCCGAGAGCGCCAAATGAAGAGACTTATAACAAATATAAATCTCCGATTATTAAATTCGG TTTAAAAGTTTTATAA
Upstream 100 bases:
>100_bases TCCTTATGAAGAAGTGATTAAAGGAATCGTACTTTTAAAAGATGCGGGTATTAAGAACGCAGGGTTAATGACCCAGGGCA AATAGTAGCAAGGATTATGT
Downstream 100 bases:
>100_bases CAACCAAGAGGTTAAAAATGAAATTAAAATCTCGTTTTACGAGTATTATCGGCGTTATCACCCTCTTTTTCAGCCAAACG GTAACGGCTGAATCAGATGT
Product: cell envelope integrity inner membrane protein TolA
Products: NA
Alternate protein names: L-Pal System TolA; NB Family Auxiliary Protein TolA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKSKNDRLELAVIVSILLHALLIGLLILGSFFTKTTLEEAAGGSGGTGEEFEAVMVDTGQVAAEYGRLKSDKKGNAKPKV EEKEEPKPEEVVEDEPTPQEIAEEQAKEQQRIAMIEEQKKQEEQRKEEQRKKAEEKRQQEIEKQEQLKKEQAEEATRKKA AEAARLKAEAEAKNLEAAAKAAEEEKKAKEAQKKLEQQKKLEEQKQAEKEAKLKAEKEAKEKAEKEAKAKAEKEAKEKAE KEAKLKAEKEAKEKAEKEAKLKAEKDAKAKAEKEAKAKAAAEAKAKADAAAKAAQAKNNKALDDFLSGGDIGGGSSKGGN KNTAGSQGNGNAKGIGDGRGTADTGYAQLIKKKLARTYRVDPSFSGRECQVKIFIDPAGNITNHQVLSGPDDICRAAVTA ITSARNVPRAPNEETYNKYKSPIIKFGLKVL
Sequences:
>Translated_431_residues MKSKNDRLELAVIVSILLHALLIGLLILGSFFTKTTLEEAAGGSGGTGEEFEAVMVDTGQVAAEYGRLKSDKKGNAKPKV EEKEEPKPEEVVEDEPTPQEIAEEQAKEQQRIAMIEEQKKQEEQRKEEQRKKAEEKRQQEIEKQEQLKKEQAEEATRKKA AEAARLKAEAEAKNLEAAAKAAEEEKKAKEAQKKLEQQKKLEEQKQAEKEAKLKAEKEAKEKAEKEAKAKAEKEAKEKAE KEAKLKAEKEAKEKAEKEAKLKAEKDAKAKAEKEAKAKAAAEAKAKADAAAKAAQAKNNKALDDFLSGGDIGGGSSKGGN KNTAGSQGNGNAKGIGDGRGTADTGYAQLIKKKLARTYRVDPSFSGRECQVKIFIDPAGNITNHQVLSGPDDICRAAVTA ITSARNVPRAPNEETYNKYKSPIIKFGLKVL >Mature_431_residues MKSKNDRLELAVIVSILLHALLIGLLILGSFFTKTTLEEAAGGSGGTGEEFEAVMVDTGQVAAEYGRLKSDKKGNAKPKV EEKEEPKPEEVVEDEPTPQEIAEEQAKEQQRIAMIEEQKKQEEQRKEEQRKKAEEKRQQEIEKQEQLKKEQAEEATRKKA AEAARLKAEAEAKNLEAAAKAAEEEKKAKEAQKKLEQQKKLEEQKQAEKEAKLKAEKEAKEKAEKEAKAKAEKEAKEKAE KEAKLKAEKEAKEKAEKEAKLKAEKDAKAKAEKEAKAKAAAEAKAKADAAAKAAQAKNNKALDDFLSGGDIGGGSSKGGN KNTAGSQGNGNAKGIGDGRGTADTGYAQLIKKKLARTYRVDPSFSGRECQVKIFIDPAGNITNHQVLSGPDDICRAAVTA ITSARNVPRAPNEETYNKYKSPIIKFGLKVL
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. Also Involved In The Translocation Of Bacteriophage DNA. [C]
COG id: COG3064
COG function: function code M; Membrane protein involved in colicin uptake
Gene ontology:
Cell location: Type II Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47015; Mature: 47015
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKNDRLELAVIVSILLHALLIGLLILGSFFTKTTLEEAAGGSGGTGEEFEAVMVDTGQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHH VAAEYGRLKSDKKGNAKPKVEEKEEPKPEEVVEDEPTPQEIAEEQAKEQQRIAMIEEQKK HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH QEEQRKEEQRKKAEEKRQQEIEKQEQLKKEQAEEATRKKAAEAARLKAEAEAKNLEAAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEEEKKAKEAQKKLEQQKKLEEQKQAEKEAKLKAEKEAKEKAEKEAKAKAEKEAKEKAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEAKLKAEKEAKEKAEKEAKLKAEKDAKAKAEKEAKAKAAAEAKAKADAAAKAAQAKNNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALDDFLSGGDIGGGSSKGGNKNTAGSQGNGNAKGIGDGRGTADTGYAQLIKKKLARTYRV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DPSFSGRECQVKIFIDPAGNITNHQVLSGPDDICRAAVTAITSARNVPRAPNEETYNKYK CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SPIIKFGLKVL HHHHHHHHHCC >Mature Secondary Structure MKSKNDRLELAVIVSILLHALLIGLLILGSFFTKTTLEEAAGGSGGTGEEFEAVMVDTGQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHH VAAEYGRLKSDKKGNAKPKVEEKEEPKPEEVVEDEPTPQEIAEEQAKEQQRIAMIEEQKK HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH QEEQRKEEQRKKAEEKRQQEIEKQEQLKKEQAEEATRKKAAEAARLKAEAEAKNLEAAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEEEKKAKEAQKKLEQQKKLEEQKQAEKEAKLKAEKEAKEKAEKEAKAKAEKEAKEKAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEAKLKAEKEAKEKAEKEAKLKAEKDAKAKAEKEAKAKAAAEAKAKADAAAKAAQAKNNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALDDFLSGGDIGGGSSKGGNKNTAGSQGNGNAKGIGDGRGTADTGYAQLIKKKLARTYRV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DPSFSGRECQVKIFIDPAGNITNHQVLSGPDDICRAAVTAITSARNVPRAPNEETYNKYK CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SPIIKFGLKVL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA