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The map label for this gene is tolR [H]

Identifier: 126207785

GI number: 126207785

Start: 333829

End: 334269

Strand: Direct

Name: tolR [H]

Synonym: APL_0301

Alternate gene names: 126207785

Gene position: 333829-334269 (Clockwise)

Preceding gene: 126207784

Following gene: 126207786

Centisome position: 14.68

GC content: 39.91

Gene sequence:

>441_bases
ATGTCTTACCGTCGTAAACGTAATGACATTAAATCTGAAATCAATATTGTCCCTTTTTTGGACGTATTGCTTGTGCTATT
GCTTATCTTTATGGCAACGGCTCCGGTCATCAGCCAAAGTGTTGAGGTTAATCTACCGGAAGATAAGCATAGTCAATCGG
TATCTAATGAAGATAAAACTCCCGTCATTTTACAAGTCGCCGATGTCGGTTTATATAAACTGAAAATTGACGGTAACTTT
GTTCAAGGCAGTAGCGGTCAAGAAGATCTCGGCGAGCAAGAAGTTATAGCATATGCCGGAGAGGCATTTCAAAAAGACCC
TAATACACTCTTCCTTGTCGCTGCGGAAAAAAATATTCCTTATGAAGAAGTGATTAAAGGAATCGTACTTTTAAAAGATG
CGGGTATTAAGAACGCAGGGTTAATGACCCAGGGCAAATAG

Upstream 100 bases:

>100_bases
TCAAGCATTCTCTAAGAAATAAAAGCGCTTGTTGAGTAATCATAAGTAGATCCGAATATATGTTCGGATCTTATATCCCA
CTAATATATAAGAGGAAAAT

Downstream 100 bases:

>100_bases
TAGCAAGGATTATGTGTGAAATCTAAAAACGACAGACTGGAACTGGCGGTTATAGTTTCAATTCTATTACATGCATTGTT
GATCGGATTGCTTATACTCG

Product: colicin uptake protein TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSYRRKRNDIKSEINIVPFLDVLLVLLLIFMATAPVISQSVEVNLPEDKHSQSVSNEDKTPVILQVADVGLYKLKIDGNF
VQGSSGQEDLGEQEVIAYAGEAFQKDPNTLFLVAAEKNIPYEEVIKGIVLLKDAGIKNAGLMTQGK

Sequences:

>Translated_146_residues
MSYRRKRNDIKSEINIVPFLDVLLVLLLIFMATAPVISQSVEVNLPEDKHSQSVSNEDKTPVILQVADVGLYKLKIDGNF
VQGSSGQEDLGEQEVIAYAGEAFQKDPNTLFLVAAEKNIPYEEVIKGIVLLKDAGIKNAGLMTQGK
>Mature_145_residues
SYRRKRNDIKSEINIVPFLDVLLVLLLIFMATAPVISQSVEVNLPEDKHSQSVSNEDKTPVILQVADVGLYKLKIDGNFV
QGSSGQEDLGEQEVIAYAGEAFQKDPNTLFLVAAEKNIPYEEVIKGIVLLKDAGIKNAGLMTQGK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1786959, Length=136, Percent_Identity=50.7352941176471, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16046; Mature: 15915

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRRKRNDIKSEINIVPFLDVLLVLLLIFMATAPVISQSVEVNLPEDKHSQSVSNEDKT
CCCCHHHHHHHHHCCEECHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCCCCCCCCCCCC
PVILQVADVGLYKLKIDGNFVQGSSGQEDLGEQEVIAYAGEAFQKDPNTLFLVAAEKNIP
CEEEEEECCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
YEEVIKGIVLLKDAGIKNAGLMTQGK
HHHHHHHHEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SYRRKRNDIKSEINIVPFLDVLLVLLLIFMATAPVISQSVEVNLPEDKHSQSVSNEDKT
CCCHHHHHHHHHCCEECHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCCCCCCCCCCCC
PVILQVADVGLYKLKIDGNFVQGSSGQEDLGEQEVIAYAGEAFQKDPNTLFLVAAEKNIP
CEEEEEECCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
YEEVIKGIVLLKDAGIKNAGLMTQGK
HHHHHHHHEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8921895 [H]