Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207687
Identifier: 126207687
GI number: 126207687
Start: 219026
End: 219430
Strand: Direct
Name: 126207687
Synonym: APL_0199
Alternate gene names: NA
Gene position: 219026-219430 (Clockwise)
Preceding gene: 126207686
Following gene: 126207688
Centisome position: 9.63
GC content: 34.57
Gene sequence:
>405_bases ATGAGTAAATATATTTGGATCTTATTTATATTCTCATCAATAAGTGTTGCCGATCCGTTTTACGGTGAGAAATTAGCGAG AGAAAACCCAACGTTTTCAGCAGATACGGAAATTGCAATGAATACGGAAAATTTGACCGCTTGTAATATCTCATTACCAC AAATTTCCCGTTACTTGCCCGCGAAACTCACGCAGTTAAAATTTATCGGCGTGTTGAAAAAAGAGGATAAATATAAAGCG ATTTTGATGGATGCTCAAAAGCAACTGTTTGATTTACAAGTGAATGATTGGCTGGCAGATGAATTAATCCAGATTATAGA CATTGATTTAAAATCTATTCGTTATATTAATTGGCAAACAGAGAAAAATTGTGAGTCTCCGACCCCGGTTATCTTAAAAT TATAG
Upstream 100 bases:
>100_bases GAAAATAGTTTGTTAAAGTTTAAAACTATTCATTTGATTAAATTAAAACAAGATAAACAATTACAGTTAAAGGCGAATGT TATCGTAACGGAGGATAAAA
Downstream 100 bases:
>100_bases GTGGAACAAGAATGCGAAAAATGATTTGGTTGCTCCTGTTTATATTAACGCCGGTTATGGCAAATACTTTTTCTCTCTCG CTGAAAAATGCGCCGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSKYIWILFIFSSISVADPFYGEKLARENPTFSADTEIAMNTENLTACNISLPQISRYLPAKLTQLKFIGVLKKEDKYKA ILMDAQKQLFDLQVNDWLADELIQIIDIDLKSIRYINWQTEKNCESPTPVILKL
Sequences:
>Translated_134_residues MSKYIWILFIFSSISVADPFYGEKLARENPTFSADTEIAMNTENLTACNISLPQISRYLPAKLTQLKFIGVLKKEDKYKA ILMDAQKQLFDLQVNDWLADELIQIIDIDLKSIRYINWQTEKNCESPTPVILKL >Mature_133_residues SKYIWILFIFSSISVADPFYGEKLARENPTFSADTEIAMNTENLTACNISLPQISRYLPAKLTQLKFIGVLKKEDKYKAI LMDAQKQLFDLQVNDWLADELIQIIDIDLKSIRYINWQTEKNCESPTPVILKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15492; Mature: 15361
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYIWILFIFSSISVADPFYGEKLARENPTFSADTEIAMNTENLTACNISLPQISRYLP CCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHCC AKLTQLKFIGVLKKEDKYKAILMDAQKQLFDLQVNDWLADELIQIIDIDLKSIRYINWQT HHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEECCC EKNCESPTPVILKL CCCCCCCCCEEEEC >Mature Secondary Structure SKYIWILFIFSSISVADPFYGEKLARENPTFSADTEIAMNTENLTACNISLPQISRYLP CCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHCC AKLTQLKFIGVLKKEDKYKAILMDAQKQLFDLQVNDWLADELIQIIDIDLKSIRYINWQT HHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEECCC EKNCESPTPVILKL CCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA