| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207651
Identifier: 126207651
GI number: 126207651
Start: 180719
End: 182578
Strand: Reverse
Name: 126207651
Synonym: APL_0163
Alternate gene names: NA
Gene position: 182578-180719 (Counterclockwise)
Preceding gene: 126207652
Following gene: 126207648
Centisome position: 8.03
GC content: 41.61
Gene sequence:
>1860_bases ATGATTCGCTTACAACCTAATCAACTTGAAGGCAAGTTAAGCTTTATTGAGCATTATCTGCACGCAAAAAATGCGGCGGA CGGTTCCAAAATGGATGCGAATGCCAATGTGACCCAAAAAAACATTGCCACCATGGAAAACGAAATGATGAAAGACTTCT TTGTGCAAATTAATCGTGCCAAAGTGAGCAATAAAATTGCGGAATTATTTGATGAAGAACTTGCGGGCGAATACTTACGT CAAATCGAATCGCACGAAATCTATGTTCACGATGAAACGAGCCTTAAACCATATTGTGTTTCCGTAACAATGTATCCTTT CTTACATGACGGACTCACAAAATTAGGCGGCGAATCTAAAGCACCAAAACATCTTGCATCATTCTGCGGTTCTTTTGTGA ATTTCGTGTTTGCGGTCAGCTCACAATTTGCCGGCGCTGTCGCTACCGTTGAATTTCTTACGTATTTCGACTATTTCGCG CGTAAAGATTTTGGCGATAACTATTTAACAACCCACCGTAGCGAAATCGAAAACCACCTACAACAAGTGGTTTACAGCAT TAACCAACCCGCTGCCGCTCGTGGCTACCAAAGCGTGTTCTGGAATATTTCGCTTTATGACAAACACTATTTTGAAGCGA TGTTCGGTAATTTTGTCTTCCCTGATTTTGAACGTCCAAATTGGGAAACCACTGCCGCACTACAAATTTTCTTTATGAAA TGGTTTAACCAAGAACGCTCTAAAGCGATTTTAACTTTCCCGGTAGTAACGGCGGCAATGCTGACCGAAAACGGTAAATG TAAAGACAATGAATTCGCCGATCAAATGGCGGAAGAACTGTCACAAGGTAACTCATTCTTTATTTATCAATCAGATAATC CTGATTCGCTCGCTTCTTGTTGCCGTTTACGCAATGAAATCTCAGATCATACGTTCTCTTACTCATTAGGTGCCGGCGGC GTGGCGACCGGTTCGATTAACGTCATTACCATCAATATGAACCGTTTAGTGCAAGATGGGCGTGACCTAGAGGAAGAAGT CGGCAAGATCCATAAATATCAATACGCTTATCGTAAATTAATGGAAGAATATTTAGCCGCCGGAATGCTACCGGTTTATG ATGCGGGATTTATTTCTTTAGATAAGCAATTCCTCACGATTGGTATCAACGGAATGGCAGAAGCCGCCGAATCACAAGGC TTGACCGTTGGTTATAACTCGGATTATATGCAGTTTGTACAAAGTCGTTTAAAAGTCATTTTTGAAGCAAATCAGACCGC TTCCAAAAAATATGGCGTGAAATTCAATACCGAATTTGTACCGGCGGAAAATCTCGGGGTAAAAAATGCGAAATGGGATA AAGCGGACGGTTATTTTGTACCTCGTGATTGCTACAACTCTTATTTCTATGTGGTTGAAGACGAAAACACCAATGCTTTG GATAAATTCTTACTGCACGGGAAAGAACTCATTGAGTGGCTAGATGGCGGCTCAGCGCTACACCTTAATTTAGATGAAGC ACTTACTCAAAGTGGCTATCGCTCATTACTTGATATTGCAGCAAAAACCGGCTGTAACTACTTCTGTATCAACGTGAAAA TTACAATTTGTAACGAATGTTCACATATTGATAAACGCACCTTATGCAGCTGCTCAAAATGCGGTTCACAAAATATCGAC TACGGCACACGCGTGATCGGCTACTTAAAACGAGTATCCGCCTTCAGTCCGCCCGACAAAAAGAACATAGCTTGCGTTTT TATCATAGAGAAGCGGCTTAACCCTCTCTGCAAAAATTGCCTGACGCAATTTTTACTGTCTCTCTCCCACAAGGGGAGAG AGTGTTTTCTATTGAAATAG
Upstream 100 bases:
>100_bases GAAAGAGGCGGTTTAAACAGTCTTACCACCAATCAACGTTTTATCGATTTACGCACCGGCGAAAATCTCAATCATTTATT CATCAAGGGAGTTTAATTAC
Downstream 100 bases:
>100_bases TCGAACAAATATCAAAAGACTAAATAAAACTGAAATGCTGGCACCAGTGTCCTCACTAGTGCCTTTTCTTTTTGAAGCTT AACACCGCTTAAGAGGAAAT
Product: anaerobic ribonucleoside triphosphate reductase
Products: NA
Alternate protein names: Anaerobic Ribonucleoside-Triphosphate Reductase; Oxygen-Sensitive Ribonucleoside-Triphosphate Reductase
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MIRLQPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRAKVSNKIAELFDEELAGEYLR QIESHEIYVHDETSLKPYCVSVTMYPFLHDGLTKLGGESKAPKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFA RKDFGDNYLTTHRSEIENHLQQVVYSINQPAAARGYQSVFWNISLYDKHYFEAMFGNFVFPDFERPNWETTAALQIFFMK WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEELSQGNSFFIYQSDNPDSLASCCRLRNEISDHTFSYSLGAGG VATGSINVITINMNRLVQDGRDLEEEVGKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLDKQFLTIGINGMAEAAESQG LTVGYNSDYMQFVQSRLKVIFEANQTASKKYGVKFNTEFVPAENLGVKNAKWDKADGYFVPRDCYNSYFYVVEDENTNAL DKFLLHGKELIEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNECSHIDKRTLCSCSKCGSQNID YGTRVIGYLKRVSAFSPPDKKNIACVFIIEKRLNPLCKNCLTQFLLSLSHKGRECFLLK
Sequences:
>Translated_619_residues MIRLQPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRAKVSNKIAELFDEELAGEYLR QIESHEIYVHDETSLKPYCVSVTMYPFLHDGLTKLGGESKAPKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFA RKDFGDNYLTTHRSEIENHLQQVVYSINQPAAARGYQSVFWNISLYDKHYFEAMFGNFVFPDFERPNWETTAALQIFFMK WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEELSQGNSFFIYQSDNPDSLASCCRLRNEISDHTFSYSLGAGG VATGSINVITINMNRLVQDGRDLEEEVGKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLDKQFLTIGINGMAEAAESQG LTVGYNSDYMQFVQSRLKVIFEANQTASKKYGVKFNTEFVPAENLGVKNAKWDKADGYFVPRDCYNSYFYVVEDENTNAL DKFLLHGKELIEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNECSHIDKRTLCSCSKCGSQNID YGTRVIGYLKRVSAFSPPDKKNIACVFIIEKRLNPLCKNCLTQFLLSLSHKGRECFLLK >Mature_619_residues MIRLQPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRAKVSNKIAELFDEELAGEYLR QIESHEIYVHDETSLKPYCVSVTMYPFLHDGLTKLGGESKAPKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFA RKDFGDNYLTTHRSEIENHLQQVVYSINQPAAARGYQSVFWNISLYDKHYFEAMFGNFVFPDFERPNWETTAALQIFFMK WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEELSQGNSFFIYQSDNPDSLASCCRLRNEISDHTFSYSLGAGG VATGSINVITINMNRLVQDGRDLEEEVGKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLDKQFLTIGINGMAEAAESQG LTVGYNSDYMQFVQSRLKVIFEANQTASKKYGVKFNTEFVPAENLGVKNAKWDKADGYFVPRDCYNSYFYVVEDENTNAL DKFLLHGKELIEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNECSHIDKRTLCSCSKCGSQNID YGTRVIGYLKRVSAFSPPDKKNIACVFIIEKRLNPLCKNCLTQFLLSLSHKGRECFLLK
Specific function: Unknown
COG id: COG1328
COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70180; Mature: 70180
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLQPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KVSNKIAELFDEELAGEYLRQIESHEIYVHDETSLKPYCVSVTMYPFLHDGLTKLGGESK HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCC APKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFARKDFGDNYLTTHRSEIENHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QQVVYSINQPAAARGYQSVFWNISLYDKHYFEAMFGNFVFPDFERPNWETTAALQIFFMK HHHHHHCCCCHHHCCCCHHEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEELSQGNSFFIYQSDNPDSLASC HHCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH CRLRNEISDHTFSYSLGAGGVATGSINVITINMNRLVQDGRDLEEEVGKIHKYQYAYRKL HHHHHHHCCCCEEEECCCCCEEECCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH MEEYLAAGMLPVYDAGFISLDKQFLTIGINGMAEAAESQGLTVGYNSDYMQFVQSRLKVI HHHHHHCCCCCCCCCCHHEECCEEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHHHHHH FEANQTASKKYGVKFNTEFVPAENLGVKNAKWDKADGYFVPRDCYNSYFYVVEDENTNAL HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCHHHCCCEEEEEECCCCCHH DKFLLHGKELIEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNEC HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCC SHIDKRTLCSCSKCGSQNIDYGTRVIGYLKRVSAFSPPDKKNIACVFIIEKRLNPLCKNC CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCHHHHHH LTQFLLSLSHKGRECFLLK HHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MIRLQPNQLEGKLSFIEHYLHAKNAADGSKMDANANVTQKNIATMENEMMKDFFVQINRA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KVSNKIAELFDEELAGEYLRQIESHEIYVHDETSLKPYCVSVTMYPFLHDGLTKLGGESK HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCC APKHLASFCGSFVNFVFAVSSQFAGAVATVEFLTYFDYFARKDFGDNYLTTHRSEIENHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QQVVYSINQPAAARGYQSVFWNISLYDKHYFEAMFGNFVFPDFERPNWETTAALQIFFMK HHHHHHCCCCHHHCCCCHHEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH WFNQERSKAILTFPVVTAAMLTENGKCKDNEFADQMAEELSQGNSFFIYQSDNPDSLASC HHCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH CRLRNEISDHTFSYSLGAGGVATGSINVITINMNRLVQDGRDLEEEVGKIHKYQYAYRKL HHHHHHHCCCCEEEECCCCCEEECCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHH MEEYLAAGMLPVYDAGFISLDKQFLTIGINGMAEAAESQGLTVGYNSDYMQFVQSRLKVI HHHHHHCCCCCCCCCCHHEECCEEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHHHHHH FEANQTASKKYGVKFNTEFVPAENLGVKNAKWDKADGYFVPRDCYNSYFYVVEDENTNAL HCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCHHHCCCEEEEEECCCCCHH DKFLLHGKELIEWLDGGSALHLNLDEALTQSGYRSLLDIAAKTGCNYFCINVKITICNEC HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCC SHIDKRTLCSCSKCGSQNIDYGTRVIGYLKRVSAFSPPDKKNIACVFIIEKRLNPLCKNC CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCHHHHHH LTQFLLSLSHKGRECFLLK HHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA