Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is gntP [C]
Identifier: 126207629
GI number: 126207629
Start: 157168
End: 158430
Strand: Direct
Name: gntP [C]
Synonym: APL_0141
Alternate gene names: 126207629
Gene position: 157168-158430 (Clockwise)
Preceding gene: 126207628
Following gene: 126207630
Centisome position: 6.91
GC content: 44.81
Gene sequence:
>1263_bases ATGGTAACAGTAACAGCAATTGGAGCAGTCGTTGCCCTTTCCGTGGCAATCGTTCTTATCTTGAAAAAAGTACCGCCGGC ATACGGAATGTTAATCGGTGCATTAGTCGGCGGTTTAATCGGCGGGGCGGATCTGTCGCAAACCGTGAGCTTAATGATCG GCGGTGCACAAGGAATTACCACGGCGGTAATGCGTATCTTAGCTGCGGGTGTATTAGCCGGTGTATTAATTGAATCCGGT GCAGCAAGTACCATCGCCGAAACCATCGTGAAAAAATTAGGCGAAACCCGTGCGTTACTTGCTTTAGTGCTTTCCACTAT GATTTTAACCGCGGTTGGGGTATTTGTGGATGTGGCGGTTATTACCGTTTCACCTATTGCATTAGCATTAGCGAAACGTA GTGATTTATCTAAGCCGGCAATCTTATTAGCGATGATTGGCGGTAGTAAAGCCGGTAATATTATGTCGCCGAACCCAAAT GCGATTGCCGCTTCAGACGCTTTCCATCTACCGCTTACTTCTGTGATGGCGGCAGGTATCATTCCGGCTATCTTCGGCAT TATTCTGACCTATTTCTTAGCAAAATGCCTTATCAACAAAGGTTCAAAAGTGGCGGACGGCGAAGTTTCTGCAAATAGTT CGCAAAATTTACCCGCTTTCCTACCGGCAATTGCCGCACCGCTTTGTGCAATTATTTTATTAGCATTGCGTCCTATCGCC GATATTAAAGTTGATCCATTGATCGCATTACCACTTGGCGGCTTAGTCGGTGCATTGGCTATGGGCAAATTAAAACAAGT GAATCAATTTGCCACTTCAGGTTTATTAAAAATGTCACCGGTTGCCGTGATGTTATTAGGTACTGGGGCATTAGCCGGCA TTATTGCCAATTCGGGTTTAAAAGATGTGTTAATTGAAGCGCTTACCGCTTCGGGCTTACCATCCTATTTACTTGCACCG ATTTCAGGGGCTTTAATGTCATTGGCTACAGCTTCAACCACAGCCGGTACGGTGGTTGCTTCAAATGTATTTAGTGCGAC TTTAATCGAATTAGGCGTAAGTGCATTAGCAAGCGCGGCAATGATTCATTCCGGTGCGACAGTTCTTGACCATATGCCGC ACGGATCTTTCTTCCATGCTACCGGTGGTAGTGTCAATATGGATATAAAAGAACGTTTAAAATTGATTCCGTATGAAACA GCGGTCGGTTTAATTATGGCTATCGTTTCAACCTTGGTGTTTGGTGTGTTTAAATTATTCTAA
Upstream 100 bases:
>100_bases ATATTTTATTTGTTTTTTGTTCTTTTTAATAACGACTTTTGGGGTGAAATTTAGATAATAAGTGCCATTCGTTGGTTCAT CTCTCTTATAGGGGCTTATT
Downstream 100 bases:
>100_bases GAGGTAAAATATGAAAATTGTTATTGCTCCCGATTCATTTAAAGAAAGTCTTACGGCGCTTGAAGTGGCACAATCTATCG AAGGCGGTTTCAGACGTATT
Product: hypothetical protein
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MVTVTAIGAVVALSVAIVLILKKVPPAYGMLIGALVGGLIGGADLSQTVSLMIGGAQGITTAVMRILAAGVLAGVLIESG AASTIAETIVKKLGETRALLALVLSTMILTAVGVFVDVAVITVSPIALALAKRSDLSKPAILLAMIGGSKAGNIMSPNPN AIAASDAFHLPLTSVMAAGIIPAIFGIILTYFLAKCLINKGSKVADGEVSANSSQNLPAFLPAIAAPLCAIILLALRPIA DIKVDPLIALPLGGLVGALAMGKLKQVNQFATSGLLKMSPVAVMLLGTGALAGIIANSGLKDVLIEALTASGLPSYLLAP ISGALMSLATASTTAGTVVASNVFSATLIELGVSALASAAMIHSGATVLDHMPHGSFFHATGGSVNMDIKERLKLIPYET AVGLIMAIVSTLVFGVFKLF
Sequences:
>Translated_420_residues MVTVTAIGAVVALSVAIVLILKKVPPAYGMLIGALVGGLIGGADLSQTVSLMIGGAQGITTAVMRILAAGVLAGVLIESG AASTIAETIVKKLGETRALLALVLSTMILTAVGVFVDVAVITVSPIALALAKRSDLSKPAILLAMIGGSKAGNIMSPNPN AIAASDAFHLPLTSVMAAGIIPAIFGIILTYFLAKCLINKGSKVADGEVSANSSQNLPAFLPAIAAPLCAIILLALRPIA DIKVDPLIALPLGGLVGALAMGKLKQVNQFATSGLLKMSPVAVMLLGTGALAGIIANSGLKDVLIEALTASGLPSYLLAP ISGALMSLATASTTAGTVVASNVFSATLIELGVSALASAAMIHSGATVLDHMPHGSFFHATGGSVNMDIKERLKLIPYET AVGLIMAIVSTLVFGVFKLF >Mature_420_residues MVTVTAIGAVVALSVAIVLILKKVPPAYGMLIGALVGGLIGGADLSQTVSLMIGGAQGITTAVMRILAAGVLAGVLIESG AASTIAETIVKKLGETRALLALVLSTMILTAVGVFVDVAVITVSPIALALAKRSDLSKPAILLAMIGGSKAGNIMSPNPN AIAASDAFHLPLTSVMAAGIIPAIFGIILTYFLAKCLINKGSKVADGEVSANSSQNLPAFLPAIAAPLCAIILLALRPIA DIKVDPLIALPLGGLVGALAMGKLKQVNQFATSGLLKMSPVAVMLLGTGALAGIIANSGLKDVLIEALTASGLPSYLLAP ISGALMSLATASTTAGTVVASNVFSATLIELGVSALASAAMIHSGATVLDHMPHGSFFHATGGSVNMDIKERLKLIPYET AVGLIMAIVSTLVFGVFKLF
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Escherichia coli, GI1790776, Length=459, Percent_Identity=25.0544662309368, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42125; Mature: 42125
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTVTAIGAVVALSVAIVLILKKVPPAYGMLIGALVGGLIGGADLSQTVSLMIGGAQGIT CEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH TAVMRILAAGVLAGVLIESGAASTIAETIVKKLGETRALLALVLSTMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALALAKRSDLSKPAILLAMIGGSKAGNIMSPNPNAIAASDAFHLPLTSVMAAGI HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH IPAIFGIILTYFLAKCLINKGSKVADGEVSANSSQNLPAFLPAIAAPLCAIILLALRPIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DIKVDPLIALPLGGLVGALAMGKLKQVNQFATSGLLKMSPVAVMLLGTGALAGIIANSGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCH KDVLIEALTASGLPSYLLAPISGALMSLATASTTAGTVVASNVFSATLIELGVSALASAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIHSGATVLDHMPHGSFFHATGGSVNMDIKERLKLIPYETAVGLIMAIVSTLVFGVFKLF HHHCCCHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVTVTAIGAVVALSVAIVLILKKVPPAYGMLIGALVGGLIGGADLSQTVSLMIGGAQGIT CEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH TAVMRILAAGVLAGVLIESGAASTIAETIVKKLGETRALLALVLSTMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALALAKRSDLSKPAILLAMIGGSKAGNIMSPNPNAIAASDAFHLPLTSVMAAGI HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH IPAIFGIILTYFLAKCLINKGSKVADGEVSANSSQNLPAFLPAIAAPLCAIILLALRPIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC DIKVDPLIALPLGGLVGALAMGKLKQVNQFATSGLLKMSPVAVMLLGTGALAGIIANSGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCH KDVLIEALTASGLPSYLLAPISGALMSLATASTTAGTVVASNVFSATLIELGVSALASAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIHSGATVLDHMPHGSFFHATGGSVNMDIKERLKLIPYETAVGLIMAIVSTLVFGVFKLF HHHCCCHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]