Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207625
Identifier: 126207625
GI number: 126207625
Start: 153009
End: 153515
Strand: Direct
Name: 126207625
Synonym: APL_0137
Alternate gene names: NA
Gene position: 153009-153515 (Clockwise)
Preceding gene: 126207624
Following gene: 126207628
Centisome position: 6.73
GC content: 41.03
Gene sequence:
>507_bases ATGGCAGATCCGCATATTAAATCCCCAATGGATTTTTGGGACTACTTTACGTTAATTATGTATCGTTTAGGTTTTGTAGT CGCGAGTATTATGGTCTTGTTACTGCCTTACCAAACGGAATGGGCTTCTCTCGGCTTGTTAATCGCCGGTACGATGTTAG CTTCTTCACTTCATCTTTATCTTAAGCGATTCCGCTTTATTTTTCAGTTTGTCGCATGGATAGGGTTGCTTTGCCAAATC TTCGGTTTGCCGATATTTGCCTTGGGCGCAATGCTGTTGGTTGTCGGTGGGCTGAGTTACAAAGAATATTTCTGTTTTAG AGTATTCGGTTTAAATGCTCAACCGTTATTAGTCGCCGTCATTTGGTTGGCCATTCTGTTAGATCAAATGCTCTTACTCC AAATTTCAAGCGGCATTAGCGGCATATTGTTAGTGGTATTAAGTATTCAGAAGTGGCGAATGCCGTTACATTTCGATATC GGCGATAAGACGAAATTTGAGGTTTAA
Upstream 100 bases:
>100_bases AACTATTGCTATAATGTGAGGCGAGTTTTATACTCGCCTTATTTTTTACAAAAAATAAACAAAAATTTAACCGCTTAATT GTATTAATAAGGAGAAAATT
Downstream 100 bases:
>100_bases TCATAAAAAAACGGCGTTTAAGCCGTTTTTTTATCTCAATTACTCTTAACGTAAAAATGCCGGAATCTTACTTTCGTAAG CAGTGATGGCATCTTCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MADPHIKSPMDFWDYFTLIMYRLGFVVASIMVLLLPYQTEWASLGLLIAGTMLASSLHLYLKRFRFIFQFVAWIGLLCQI FGLPIFALGAMLLVVGGLSYKEYFCFRVFGLNAQPLLVAVIWLAILLDQMLLLQISSGISGILLVVLSIQKWRMPLHFDI GDKTKFEV
Sequences:
>Translated_168_residues MADPHIKSPMDFWDYFTLIMYRLGFVVASIMVLLLPYQTEWASLGLLIAGTMLASSLHLYLKRFRFIFQFVAWIGLLCQI FGLPIFALGAMLLVVGGLSYKEYFCFRVFGLNAQPLLVAVIWLAILLDQMLLLQISSGISGILLVVLSIQKWRMPLHFDI GDKTKFEV >Mature_167_residues ADPHIKSPMDFWDYFTLIMYRLGFVVASIMVLLLPYQTEWASLGLLIAGTMLASSLHLYLKRFRFIFQFVAWIGLLCQIF GLPIFALGAMLLVVGGLSYKEYFCFRVFGLNAQPLLVAVIWLAILLDQMLLLQISSGISGILLVVLSIQKWRMPLHFDIG DKTKFEV
Specific function: Unknown
COG id: COG5413
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019275 [H]
Pfam domain/function: PF10063 DUF2301 [H]
EC number: NA
Molecular weight: Translated: 19128; Mature: 18996
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPHIKSPMDFWDYFTLIMYRLGFVVASIMVLLLPYQTEWASLGLLIAGTMLASSLHLY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LKRFRFIFQFVAWIGLLCQIFGLPIFALGAMLLVVGGLSYKEYFCFRVFGLNAQPLLVAV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH IWLAILLDQMLLLQISSGISGILLVVLSIQKWRMPLHFDIGDKTKFEV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC >Mature Secondary Structure ADPHIKSPMDFWDYFTLIMYRLGFVVASIMVLLLPYQTEWASLGLLIAGTMLASSLHLY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LKRFRFIFQFVAWIGLLCQIFGLPIFALGAMLLVVGGLSYKEYFCFRVFGLNAQPLLVAV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH IWLAILLDQMLLLQISSGISGILLVVLSIQKWRMPLHFDIGDKTKFEV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]