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The map label for this gene is yfeD [C]

Identifier: 126207615

GI number: 126207615

Start: 142799

End: 143629

Strand: Reverse

Name: yfeD [C]

Synonym: APL_0127

Alternate gene names: 126207615

Gene position: 143629-142799 (Counterclockwise)

Preceding gene: 126207616

Following gene: 126207614

Centisome position: 6.31

GC content: 40.43

Gene sequence:

>831_bases
ATGAATGAGTTAGTGCTATGGTTCGTTGAGCCTTTTGCATTTGAATTTATGCAAACCGCTTTGTTTACTGCGGTATTAGT
CGCTTCCGTTTGCGCGGTATTGTCTTGTTATTTGATTTTAAAAGGCTGGTCGCTTATGGGCGATGCAATTTCTCATGCAG
TATTGCCGGGAGTGGTAATATCCAGCTTACTCGGTTTACCTTTAGCTATAGGGGCATTTACTTCCGGATTATTTTGTGCG
ATTTCCGTCGGCTATCTCAAAGAGAATTCTCGTTTAAAAGAAGATACCATTATGGGCATTATGTTTTCCGGCTTATTTGC
GCTTGGTATCGTGCTATTTACCGCTTTGCCGAGCGACCAACATCTCACTCACTTGTTATTCGGTAATTTGCTCGGGGTAA
CTCAAAACGAATTAATTCAAACTATCATCATTTGCACGCTAACTTTCAGCGTTATTATCTTTAAACGTAAAGATTTCTTG
CTCTATTGCTTTGATAGTAATCATGCCAAAGTTATCGGTTTACCGGTAAAACGGTTACATTACGGCTTACTTGCACTGTT
AGCCTTAACCATCATTAGTGCAATGCAGGTTGTCGGTGTGATCTTAGTCGTTGCAATGCTCATTGCTCCCGGAATTACCG
CCTACCAATTATCAAACCGATTCGACTATATGTTAGCAATAGCGATGACGATTGCGATAAGTTCATCCGCTTTAGGTACG
ATTTTGAGTTATCATATTGATGCAGCTACCGGCCCGACAATTATTCTAATTCAATCGATTGTTTTTGTGATTGTGCTAAT
TAGCAAGCACTTTCAAAAGCGCAAGCGGTAA

Upstream 100 bases:

>100_bases
GTGATTGTTTGCTTACAGACCTGTATCTTTTTATTGGCTTTTTGCTTTGCGCCTAAATACGGTTTGATTAGCCAAAAACG
TAAGCGTTTGGGGGCAATCA

Downstream 100 bases:

>100_bases
AATTTTTTGCAAAATTTGCCAAAAAATTAGAGAATTATTATTTCTAAACAACACTCTCATAAGGAATACCTATGTCAAAC
ACCACATTTGAAGAAACAAT

Product: putative iron transport system membrane protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNELVLWFVEPFAFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVISSLLGLPLAIGAFTSGLFCA
ISVGYLKENSRLKEDTIMGIMFSGLFALGIVLFTALPSDQHLTHLLFGNLLGVTQNELIQTIIICTLTFSVIIFKRKDFL
LYCFDSNHAKVIGLPVKRLHYGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLAIAMTIAISSSALGT
ILSYHIDAATGPTIILIQSIVFVIVLISKHFQKRKR

Sequences:

>Translated_276_residues
MNELVLWFVEPFAFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVISSLLGLPLAIGAFTSGLFCA
ISVGYLKENSRLKEDTIMGIMFSGLFALGIVLFTALPSDQHLTHLLFGNLLGVTQNELIQTIIICTLTFSVIIFKRKDFL
LYCFDSNHAKVIGLPVKRLHYGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLAIAMTIAISSSALGT
ILSYHIDAATGPTIILIQSIVFVIVLISKHFQKRKR
>Mature_276_residues
MNELVLWFVEPFAFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVISSLLGLPLAIGAFTSGLFCA
ISVGYLKENSRLKEDTIMGIMFSGLFALGIVLFTALPSDQHLTHLLFGNLLGVTQNELIQTIIICTLTFSVIIFKRKDFL
LYCFDSNHAKVIGLPVKRLHYGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLAIAMTIAISSSALGT
ILSYHIDAATGPTIILIQSIVFVIVLISKHFQKRKR

Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron (Potential) [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=257, Percent_Identity=25.2918287937743, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 30045; Mature: 30045

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELVLWFVEPFAFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLLGLPLAIGAFTSGLFCAISVGYLKENSRLKEDTIMGIMFSGLFALGIVLFTALPSDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HLTHLLFGNLLGVTQNELIQTIIICTLTFSVIIFKRKDFLLYCFDSNHAKVIGLPVKRLH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECCHHHHH
YGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLAIAMTIAISSSALGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ILSYHIDAATGPTIILIQSIVFVIVLISKHFQKRKR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNELVLWFVEPFAFEFMQTALFTAVLVASVCAVLSCYLILKGWSLMGDAISHAVLPGVVI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLLGLPLAIGAFTSGLFCAISVGYLKENSRLKEDTIMGIMFSGLFALGIVLFTALPSDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HLTHLLFGNLLGVTQNELIQTIIICTLTFSVIIFKRKDFLLYCFDSNHAKVIGLPVKRLH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECCHHHHH
YGLLALLALTIISAMQVVGVILVVAMLIAPGITAYQLSNRFDYMLAIAMTIAISSSALGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ILSYHIDAATGPTIILIQSIVFVIVLISKHFQKRKR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]