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The map label for this gene is nrfB [H]

Identifier: 126207589

GI number: 126207589

Start: 107892

End: 108539

Strand: Direct

Name: nrfB [H]

Synonym: APL_0101

Alternate gene names: 126207589

Gene position: 107892-108539 (Clockwise)

Preceding gene: 126207588

Following gene: 126207590

Centisome position: 4.74

GC content: 43.98

Gene sequence:

>648_bases
ATGAAAAACATTATCTCAAAAGCAGGGCGAGCAATCGCCCTCCAAGCGGTCGCTTTTGCAAGTTTTCTTGCAATTTCAAC
CGCTAGCCAAGCGGATATGCCGCAGCAACCGAAACCACTTTGGACACAGCAAGCAAGTGATGCGCAAATTGCGGAAGATG
CACGCCGTGATCCGAATAAATATTGTGTGCAATGTCACGAATCGGCAAACGCAACCGGTAAACCTTTCCATCATGCGGGT
AAACACTTCCAAAAAGATGCGAAAAGCCCGAATACCGGCGAACAAGTAACTTGTGTCAGTTGTCACGGCAATATTTCCGA
AAATCACCGTAAAGGTGTGAAAGATGTAATGCGTTTTAATCCGCACGGTAAAGCGAGCAACCCTTCACTTGAACGTTCGG
TTCACGAACAAAATCAAGTATGCGTAGCTTGCCATACCGCAGACAAATTACGTGAAAAATTCTGGGCGCACGATACGCAT
GCTGCGAAAATTTCATGTACGAACTGCCATGAATTACATCCGGAAAAAGAACCGATGAAAGGTATTGAAGAAAAACAACG
TATTAAACTTTGCGTTGATTGTCATACCAAAGTTCAAAAAGGCGAGTTTAACACTCCGGCAAAAACAGAAGTGAAGGAAA
CCAAATAA

Upstream 100 bases:

>100_bases
ATGCGGAAGCACGTAAAAAAGGCTTATTACCTGCAGAAGAACCAAAAGCAGTTGTAGCACCAAAAGCAGAAGCGAAATAA
TAGAAGCTTGAGGTGAAATT

Downstream 100 bases:

>100_bases
TGACTTGCACCCGTAGAGACTTCGTCTCAGGGGCAGGTGCTATCGCTGTCGTAGCAAGCACTGGGCTTGCTACCTCAGTA
ACTCTTGCTACTGAGAAAGA

Product: cytochrome c nitrite reductase pentaheme subunit

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKNIISKAGRAIALQAVAFASFLAISTASQADMPQQPKPLWTQQASDAQIAEDARRDPNKYCVQCHESANATGKPFHHAG
KHFQKDAKSPNTGEQVTCVSCHGNISENHRKGVKDVMRFNPHGKASNPSLERSVHEQNQVCVACHTADKLREKFWAHDTH
AAKISCTNCHELHPEKEPMKGIEEKQRIKLCVDCHTKVQKGEFNTPAKTEVKETK

Sequences:

>Translated_215_residues
MKNIISKAGRAIALQAVAFASFLAISTASQADMPQQPKPLWTQQASDAQIAEDARRDPNKYCVQCHESANATGKPFHHAG
KHFQKDAKSPNTGEQVTCVSCHGNISENHRKGVKDVMRFNPHGKASNPSLERSVHEQNQVCVACHTADKLREKFWAHDTH
AAKISCTNCHELHPEKEPMKGIEEKQRIKLCVDCHTKVQKGEFNTPAKTEVKETK
>Mature_215_residues
MKNIISKAGRAIALQAVAFASFLAISTASQADMPQQPKPLWTQQASDAQIAEDARRDPNKYCVQCHESANATGKPFHHAG
KHFQKDAKSPNTGEQVTCVSCHGNISENHRKGVKDVMRFNPHGKASNPSLERSVHEQNQVCVACHTADKLREKFWAHDTH
AAKISCTNCHELHPEKEPMKGIEEKQRIKLCVDCHTKVQKGEFNTPAKTEVKETK

Specific function: Plays a role in nitrite reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082366, Length=169, Percent_Identity=40.2366863905325, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017564
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23912; Mature: 23912

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIISKAGRAIALQAVAFASFLAISTASQADMPQQPKPLWTQQASDAQIAEDARRDPNK
CCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCHH
YCVQCHESANATGKPFHHAGKHFQKDAKSPNTGEQVTCVSCHGNISENHRKGVKDVMRFN
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
PHGKASNPSLERSVHEQNQVCVACHTADKLREKFWAHDTHAAKISCTNCHELHPEKEPMK
CCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHH
GIEEKQRIKLCVDCHTKVQKGEFNTPAKTEVKETK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNIISKAGRAIALQAVAFASFLAISTASQADMPQQPKPLWTQQASDAQIAEDARRDPNK
CCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCHH
YCVQCHESANATGKPFHHAGKHFQKDAKSPNTGEQVTCVSCHGNISENHRKGVKDVMRFN
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
PHGKASNPSLERSVHEQNQVCVACHTADKLREKFWAHDTHAAKISCTNCHELHPEKEPMK
CCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHH
GIEEKQRIKLCVDCHTKVQKGEFNTPAKTEVKETK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]