Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is ytzA [H]

Identifier: 126207578

GI number: 126207578

Start: 97196

End: 97660

Strand: Reverse

Name: ytzA [H]

Synonym: APL_0090

Alternate gene names: 126207578

Gene position: 97660-97196 (Counterclockwise)

Preceding gene: 126207579

Following gene: 126207577

Centisome position: 4.29

GC content: 37.85

Gene sequence:

>465_bases
ATGCCATTTCTTTTTATTTTATTCGGCATTTTTCTGTATATCTACTTCGAGATCTCATTATTGGTCTCAATCGGATCACA
AATCGGGGTGTTACCGCTAATTTTGTTACTGATCGGTATTTCCGCACTAGGCTTATGGTTTGTGAAATTACGCGGTATCT
ACGCCATTTATTCCGTACGTAACGAATTAAGTCAAGGAAAAATCCCGACCCAAGCGGTGATCGGCTCGCTTCTGTTTATT
TTAGCCGGCATTTTTTTAATTATTCCCGGTTTTTTAAGCGATATTATTGCGATTTTATTAATGTTGCCGGTAACTCGTCA
TATTGCCGAACGCTATTTGATGCGTTTCTTTAAAGCAAGAGTACGCTTTAGCCATTTTTCAAGCGGTCAATTTTCACAGC
AAGATAACAATACGTTTGATGCCGAATTTGAACGCAAACAAGATCAGGATAAATGGATTAAATAG

Upstream 100 bases:

>100_bases
AATATTGTAATGCGTTCGCAAGGCGCGGAGAATTTAACCCAAAAAGCGGAAATTGAACTTCAACTTTCCGATCATTAAAG
CATTCAAATAAGGAACTGCT

Downstream 100 bases:

>100_bases
TGGATAAACATTCGCTCGCACTATTGAAAGTGCATTTTACCGCCATCTTTTTTGGTGCTTCCGGTATTTTTGGTGCATTA
ATTAAAAGCCGCCCGGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFI
LAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK

Sequences:

>Translated_154_residues
MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFI
LAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK
>Mature_153_residues
PFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFIL
AGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK

Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]

COG id: COG3030

COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0716 (fxsA) family [H]

Homologues:

Organism=Escherichia coli, GI87082376, Length=152, Percent_Identity=31.5789473684211, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007313 [H]

Pfam domain/function: PF04186 FxsA [H]

EC number: NA

Molecular weight: Translated: 17652; Mature: 17521

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVR
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NELSQGKIPTQAVIGSLLFILAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK
HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
PFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NELSQGKIPTQAVIGSLLFILAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK
HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]