| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is ytzA [H]
Identifier: 126207578
GI number: 126207578
Start: 97196
End: 97660
Strand: Reverse
Name: ytzA [H]
Synonym: APL_0090
Alternate gene names: 126207578
Gene position: 97660-97196 (Counterclockwise)
Preceding gene: 126207579
Following gene: 126207577
Centisome position: 4.29
GC content: 37.85
Gene sequence:
>465_bases ATGCCATTTCTTTTTATTTTATTCGGCATTTTTCTGTATATCTACTTCGAGATCTCATTATTGGTCTCAATCGGATCACA AATCGGGGTGTTACCGCTAATTTTGTTACTGATCGGTATTTCCGCACTAGGCTTATGGTTTGTGAAATTACGCGGTATCT ACGCCATTTATTCCGTACGTAACGAATTAAGTCAAGGAAAAATCCCGACCCAAGCGGTGATCGGCTCGCTTCTGTTTATT TTAGCCGGCATTTTTTTAATTATTCCCGGTTTTTTAAGCGATATTATTGCGATTTTATTAATGTTGCCGGTAACTCGTCA TATTGCCGAACGCTATTTGATGCGTTTCTTTAAAGCAAGAGTACGCTTTAGCCATTTTTCAAGCGGTCAATTTTCACAGC AAGATAACAATACGTTTGATGCCGAATTTGAACGCAAACAAGATCAGGATAAATGGATTAAATAG
Upstream 100 bases:
>100_bases AATATTGTAATGCGTTCGCAAGGCGCGGAGAATTTAACCCAAAAAGCGGAAATTGAACTTCAACTTTCCGATCATTAAAG CATTCAAATAAGGAACTGCT
Downstream 100 bases:
>100_bases TGGATAAACATTCGCTCGCACTATTGAAAGTGCATTTTACCGCCATCTTTTTTGGTGCTTCCGGTATTTTTGGTGCATTA ATTAAAAGCCGCCCGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFI LAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK
Sequences:
>Translated_154_residues MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFI LAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK >Mature_153_residues PFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVRNELSQGKIPTQAVIGSLLFIL AGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKARVRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
Organism=Escherichia coli, GI87082376, Length=152, Percent_Identity=31.5789473684211, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 17652; Mature: 17521
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVR CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELSQGKIPTQAVIGSLLFILAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKAR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure PFLFILFGIFLYIYFEISLLVSIGSQIGVLPLILLLIGISALGLWFVKLRGIYAIYSVR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELSQGKIPTQAVIGSLLFILAGIFLIIPGFLSDIIAILLMLPVTRHIAERYLMRFFKAR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRFSHFSSGQFSQQDNNTFDAEFERKQDQDKWIK HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]