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The map label for this gene is ybbN [C]

Identifier: 126207568

GI number: 126207568

Start: 89221

End: 90066

Strand: Direct

Name: ybbN [C]

Synonym: APL_0080

Alternate gene names: 126207568

Gene position: 89221-90066 (Clockwise)

Preceding gene: 126207567

Following gene: 126207572

Centisome position: 3.92

GC content: 39.36

Gene sequence:

>846_bases
ATGAATTATTTTGTCAATGTTACCGAAAGTAATTTTAGTGAAGTGTGGAATGCGGCGACACAAGTGCCGGTCGTGTTTAA
TTTTATCTCGCCGAGAGAAGTGGCTTCATTGGAAATGGATTCATTATTACGCCGGTTGGCGGATGAAAATCCGGCACAAT
TTTTATTGGCAACCGTGAATTGTGACGAACAACAAGCATTGGCAGCTCAATTTAGAATTCAAACGATTCCGACCATGTAT
CTTTTTTCTGGCGGGCAACCGGTTGATATGATTCAAGGGGCAATTTCCGAGCAAGAAATGCGAGTGCGTTTAGCCAATAT
TTTACCGAAAGAAGAAGAGCTTAAATTTAATCAAGCTTTAGAATTGCTGCAAGATCAGTGTTATGAAGAAGCGTTACCGC
TACTCAAATCGGCATGGGAAATGACCGATAAGAAAAACAGTGATTTCGCATTGCTTTATGCGGAAACATTTATCGTGATG
AAGAAAGTGGAAGAGGCTCGTGAAATCTTAAAGCAAATTCCGATTCAAGATCGTGATAGTCGTTGGAACGGTTTACAGGC
ACAGATCGAGTTGTTAGAACAAGCAAACGAATCACCTGAATTACAGCAATTACAAGCAGATTATGCAAATAACAAAACTC
CGGAAATTGCGATTCGTTTAGCAAATCAGTTACATCAAGCACATAAAAATGAAGAGGCGTTAGTGCTATTGTTTGATTGG
CTAAAAGCCGATTTAAATAGTGCAAACGGCGAAGTTAAAAGCCAATTTTTAGCGATTCTTTCTGCTTTAGGTAATGATCC
TATCGTGCCGAAATTCAGACGTCAGCTTTATTCATTGCTCTATTAA

Upstream 100 bases:

>100_bases
AAAGGCGGTTTCGACGGTTGGGAAAGAAGCGGTTTACCGATTGAAACGGCTTACTAAAAATAAAGTATAATTTGCCGATT
TTTTAGATTAGGAAAAGAGT

Downstream 100 bases:

>100_bases
TCGTATTTGAAGCAAAAAAATGAGGCGAAAGTATTATTCCGCCTCATTTTTTATTGGGTAAATTTTTCAGAAAATTAGAC
CGCTTGTTGCTGCTTTAATG

Product: putative thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNYFVNVTESNFSEVWNAATQVPVVFNFISPREVASLEMDSLLRRLADENPAQFLLATVNCDEQQALAAQFRIQTIPTMY
LFSGGQPVDMIQGAISEQEMRVRLANILPKEEELKFNQALELLQDQCYEEALPLLKSAWEMTDKKNSDFALLYAETFIVM
KKVEEAREILKQIPIQDRDSRWNGLQAQIELLEQANESPELQQLQADYANNKTPEIAIRLANQLHQAHKNEEALVLLFDW
LKADLNSANGEVKSQFLAILSALGNDPIVPKFRRQLYSLLY

Sequences:

>Translated_281_residues
MNYFVNVTESNFSEVWNAATQVPVVFNFISPREVASLEMDSLLRRLADENPAQFLLATVNCDEQQALAAQFRIQTIPTMY
LFSGGQPVDMIQGAISEQEMRVRLANILPKEEELKFNQALELLQDQCYEEALPLLKSAWEMTDKKNSDFALLYAETFIVM
KKVEEAREILKQIPIQDRDSRWNGLQAQIELLEQANESPELQQLQADYANNKTPEIAIRLANQLHQAHKNEEALVLLFDW
LKADLNSANGEVKSQFLAILSALGNDPIVPKFRRQLYSLLY
>Mature_281_residues
MNYFVNVTESNFSEVWNAATQVPVVFNFISPREVASLEMDSLLRRLADENPAQFLLATVNCDEQQALAAQFRIQTIPTMY
LFSGGQPVDMIQGAISEQEMRVRLANILPKEEELKFNQALELLQDQCYEEALPLLKSAWEMTDKKNSDFALLYAETFIVM
KKVEEAREILKQIPIQDRDSRWNGLQAQIELLEQANESPELQQLQADYANNKTPEIAIRLANQLHQAHKNEEALVLLFDW
LKADLNSANGEVKSQFLAILSALGNDPIVPKFRRQLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081747, Length=282, Percent_Identity=48.2269503546099, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32152; Mature: 32152

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFVNVTESNFSEVWNAATQVPVVFNFISPREVASLEMDSLLRRLADENPAQFLLATVN
CCEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEEC
CDEQQALAAQFRIQTIPTMYLFSGGQPVDMIQGAISEQEMRVRLANILPKEEELKFNQAL
CCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ELLQDQCYEEALPLLKSAWEMTDKKNSDFALLYAETFIVMKKVEEAREILKQIPIQDRDS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RWNGLQAQIELLEQANESPELQQLQADYANNKTPEIAIRLANQLHQAHKNEEALVLLFDW
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHH
LKADLNSANGEVKSQFLAILSALGNDPIVPKFRRQLYSLLY
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNYFVNVTESNFSEVWNAATQVPVVFNFISPREVASLEMDSLLRRLADENPAQFLLATVN
CCEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEEC
CDEQQALAAQFRIQTIPTMYLFSGGQPVDMIQGAISEQEMRVRLANILPKEEELKFNQAL
CCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ELLQDQCYEEALPLLKSAWEMTDKKNSDFALLYAETFIVMKKVEEAREILKQIPIQDRDS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RWNGLQAQIELLEQANESPELQQLQADYANNKTPEIAIRLANQLHQAHKNEEALVLLFDW
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHH
LKADLNSANGEVKSQFLAILSALGNDPIVPKFRRQLYSLLY
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]