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The map label for this gene is recN [H]

Identifier: 126207513

GI number: 126207513

Start: 28786

End: 30459

Strand: Direct

Name: recN [H]

Synonym: APL_0025

Alternate gene names: 126207513

Gene position: 28786-30459 (Clockwise)

Preceding gene: 126207512

Following gene: 126207519

Centisome position: 1.27

GC content: 41.64

Gene sequence:

>1674_bases
ATGCTTACTCATTTAACGGTTAATAATTTTGCGATTGTTCGTCACTTAACATTAGAGCTGAATGAAGGTATGTCCGTGAT
TACCGGCGAAACCGGGGCGGGTAAGTCCATTGCGATTGATGCGTTAAGCCTTTGTCTCGGCTATCGTTCGGAAAGCAGTA
TGATTCGTCATGGTGCGGATAAAGCGGATATTACCGCAACTTTTAGTATGCAACCGACTAGCCCTGCTTATTCGTGGTTA
CAGCAACACGAGCTGTTAGATGAAGATAACCCGCAAGAATGTATTTTACGCCGTATGATTAATCAAGAAGGGCGTTCTAA
AGCATTCGTGAATAATCGCCCGTTACCGATTTCTCAACTGCGAGAGTTAGGTCAATATCTGATTCATTTGAACGGCCAGC
ATGCACCGCAATTATTATTAAAAAGTGAGTATCAGTTGGAGGTATTGGATAACTATGCGGGTATTCATAACTTGTTGAAT
GAAATGAGTAGCCAATACCAGCGTTGGAAGAAATTACATCAGCAAGTGAAAAATTTCCGCCAACAGTGCCAAGAGAATGA
GGCTCGTAAACAGCTGCTGCAATATCAAGTAGATGAGCTAGATGAGTTTGCGATTAAGCAAGGTGAATTTGAGGAAATGG
AAGAAACGCATAGCCGGTTATCCAATTCCGAAGCATTAACCGCATTATCCCAAGAGGTGACTGATTTACTGAGCGAAAGT
GAACTAAATGTCGATTCAATGTTATATAAGGCGATTCGTCATTTAGAAGATTTAGTCGAGGTTGATTCACGTTATCAATC
GGCATTAAATATGCTCAATGAATCACTTATTCAGGTTCAGGAAGCCAGTTCCGAGGTGAGTGATTTAGCCGGCAAAATAG
AGCAAGATCCGGATTTACTCAATGAGTTGGATATACGTATCAGTAAGACGCTTCAATTAGCCCGTAAGCACCATGTATTG
CCGGAGAATTTATGGCAACATCACGAATTTATTCAGCAAGAATTACAAAAACTGGTGGATTTTGCCGGAAATGAAGAACA
GTTAATTGCGGATGAGCAAGCGGCTCATCAACAGTCTATTCAGCTGGCTGAGCAAATTTATCAAAAGCGTCTTGAGGCAG
GTAAAAAATTAGCTGAGCAAGTGACGGCACAAATTAAACGTCTTTCAATGGAAAACGGCGAGTTCTTTATTGATGTTCAG
CATGATGCAAAAAGATTATCAAGCAACGGGGCTGATGATGTTGAATTTAATTTGCGCAGTAATTTAGGGCAACAGGCTCA
GCCGTTAGCTAAAATCGCTTCCGGCGGTGAGTTATCACGTATTTCCTTGGCTGTACAGGTGTTGACGGCAAATAAATTAT
CCACACCGACAATTATTTTTGATGAGGTGGATGTTGGGATTAGTGGACTGACGGCCACTACAGTCGGTAAGCTGTTACGC
CAATTAGGTAAGAAATGTCAGGTGCTTTGCGTGACACATTTACCGCAGGTAGCAAGCTATGGGCATCACCATTTTAATGT
GCAAAAGTATGTGGAAAATAATCAGACGGAAACTCAAATGTCGTTATTAACCCAAGCGGAACGCGTTCAGACCTTAGCAA
GATTATTAGGTGGAAGTAAGATTACCGATACGGTGCTTGCTAATGCACAGGAAATGCTAGATTTAGTTGAATAA

Upstream 100 bases:

>100_bases
TAAGCGGCCGGATTCAGCAAAAATTTTGCAAAAACACTTTACTGTTCAAAAAAACAGTAATAGTATATATCTATACAGAG
TATATTTTTACAGGTGTTTT

Downstream 100 bases:

>100_bases
CATCACTGAGTAACATAGTCAAATTAAACGAAATAAGCGGTCGTTTTTTTAGAGAACAACGCAATTTTTGCAAAGTTTTC
CTAAAAAAACGACCGCTTGT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLTHLTVNNFAIVRHLTLELNEGMSVITGETGAGKSIAIDALSLCLGYRSESSMIRHGADKADITATFSMQPTSPAYSWL
QQHELLDEDNPQECILRRMINQEGRSKAFVNNRPLPISQLRELGQYLIHLNGQHAPQLLLKSEYQLEVLDNYAGIHNLLN
EMSSQYQRWKKLHQQVKNFRQQCQENEARKQLLQYQVDELDEFAIKQGEFEEMEETHSRLSNSEALTALSQEVTDLLSES
ELNVDSMLYKAIRHLEDLVEVDSRYQSALNMLNESLIQVQEASSEVSDLAGKIEQDPDLLNELDIRISKTLQLARKHHVL
PENLWQHHEFIQQELQKLVDFAGNEEQLIADEQAAHQQSIQLAEQIYQKRLEAGKKLAEQVTAQIKRLSMENGEFFIDVQ
HDAKRLSSNGADDVEFNLRSNLGQQAQPLAKIASGGELSRISLAVQVLTANKLSTPTIIFDEVDVGISGLTATTVGKLLR
QLGKKCQVLCVTHLPQVASYGHHHFNVQKYVENNQTETQMSLLTQAERVQTLARLLGGSKITDTVLANAQEMLDLVE

Sequences:

>Translated_557_residues
MLTHLTVNNFAIVRHLTLELNEGMSVITGETGAGKSIAIDALSLCLGYRSESSMIRHGADKADITATFSMQPTSPAYSWL
QQHELLDEDNPQECILRRMINQEGRSKAFVNNRPLPISQLRELGQYLIHLNGQHAPQLLLKSEYQLEVLDNYAGIHNLLN
EMSSQYQRWKKLHQQVKNFRQQCQENEARKQLLQYQVDELDEFAIKQGEFEEMEETHSRLSNSEALTALSQEVTDLLSES
ELNVDSMLYKAIRHLEDLVEVDSRYQSALNMLNESLIQVQEASSEVSDLAGKIEQDPDLLNELDIRISKTLQLARKHHVL
PENLWQHHEFIQQELQKLVDFAGNEEQLIADEQAAHQQSIQLAEQIYQKRLEAGKKLAEQVTAQIKRLSMENGEFFIDVQ
HDAKRLSSNGADDVEFNLRSNLGQQAQPLAKIASGGELSRISLAVQVLTANKLSTPTIIFDEVDVGISGLTATTVGKLLR
QLGKKCQVLCVTHLPQVASYGHHHFNVQKYVENNQTETQMSLLTQAERVQTLARLLGGSKITDTVLANAQEMLDLVE
>Mature_557_residues
MLTHLTVNNFAIVRHLTLELNEGMSVITGETGAGKSIAIDALSLCLGYRSESSMIRHGADKADITATFSMQPTSPAYSWL
QQHELLDEDNPQECILRRMINQEGRSKAFVNNRPLPISQLRELGQYLIHLNGQHAPQLLLKSEYQLEVLDNYAGIHNLLN
EMSSQYQRWKKLHQQVKNFRQQCQENEARKQLLQYQVDELDEFAIKQGEFEEMEETHSRLSNSEALTALSQEVTDLLSES
ELNVDSMLYKAIRHLEDLVEVDSRYQSALNMLNESLIQVQEASSEVSDLAGKIEQDPDLLNELDIRISKTLQLARKHHVL
PENLWQHHEFIQQELQKLVDFAGNEEQLIADEQAAHQQSIQLAEQIYQKRLEAGKKLAEQVTAQIKRLSMENGEFFIDVQ
HDAKRLSSNGADDVEFNLRSNLGQQAQPLAKIASGGELSRISLAVQVLTANKLSTPTIIFDEVDVGISGLTATTVGKLLR
QLGKKCQVLCVTHLPQVASYGHHHFNVQKYVENNQTETQMSLLTQAERVQTLARLLGGSKITDTVLANAQEMLDLVE

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=49.6389891696751, Blast_Score=536, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62901; Mature: 62901

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLTVNNFAIVRHLTLELNEGMSVITGETGAGKSIAIDALSLCLGYRSESSMIRHGAD
CCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCC
KADITATFSMQPTSPAYSWLQQHELLDEDNPQECILRRMINQEGRSKAFVNNRPLPISQL
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RELGQYLIHLNGQHAPQLLLKSEYQLEVLDNYAGIHNLLNEMSSQYQRWKKLHQQVKNFR
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQCQENEARKQLLQYQVDELDEFAIKQGEFEEMEETHSRLSNSEALTALSQEVTDLLSES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
ELNVDSMLYKAIRHLEDLVEVDSRYQSALNMLNESLIQVQEASSEVSDLAGKIEQDPDLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NELDIRISKTLQLARKHHVLPENLWQHHEFIQQELQKLVDFAGNEEQLIADEQAAHQQSI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLAEQIYQKRLEAGKKLAEQVTAQIKRLSMENGEFFIDVQHDAKRLSSNGADDVEFNLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEECHHH
NLGQQAQPLAKIASGGELSRISLAVQVLTANKLSTPTIIFDEVDVGISGLTATTVGKLLR
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
QLGKKCQVLCVTHLPQVASYGHHHFNVQKYVENNQTETQMSLLTQAERVQTLARLLGGSK
HHHHHHEEHHHHHCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ITDTVLANAQEMLDLVE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTHLTVNNFAIVRHLTLELNEGMSVITGETGAGKSIAIDALSLCLGYRSESSMIRHGAD
CCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCC
KADITATFSMQPTSPAYSWLQQHELLDEDNPQECILRRMINQEGRSKAFVNNRPLPISQL
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RELGQYLIHLNGQHAPQLLLKSEYQLEVLDNYAGIHNLLNEMSSQYQRWKKLHQQVKNFR
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQCQENEARKQLLQYQVDELDEFAIKQGEFEEMEETHSRLSNSEALTALSQEVTDLLSES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
ELNVDSMLYKAIRHLEDLVEVDSRYQSALNMLNESLIQVQEASSEVSDLAGKIEQDPDLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NELDIRISKTLQLARKHHVLPENLWQHHEFIQQELQKLVDFAGNEEQLIADEQAAHQQSI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLAEQIYQKRLEAGKKLAEQVTAQIKRLSMENGEFFIDVQHDAKRLSSNGADDVEFNLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEECHHH
NLGQQAQPLAKIASGGELSRISLAVQVLTANKLSTPTIIFDEVDVGISGLTATTVGKLLR
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
QLGKKCQVLCVTHLPQVASYGHHHFNVQKYVENNQTETQMSLLTQAERVQTLARLLGGSK
HHHHHHEEHHHHHCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ITDTVLANAQEMLDLVE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]