| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is phoB [H]
Identifier: 126175726
GI number: 126175726
Start: 4148666
End: 4149943
Strand: Direct
Name: phoB [H]
Synonym: Sbal_3529
Alternate gene names: 126175726
Gene position: 4148666-4149943 (Clockwise)
Preceding gene: 126175724
Following gene: 126175727
Centisome position: 80.91
GC content: 50.23
Gene sequence:
>1278_bases TTGCTGTTATCTACGCCAGTTTGGGCAGATGAAACGGGTCCAACGAAAGCGCCATCGCGACCGAAAAATATCGTCATTAT GATAGGTGATGGTATGGGGCCGTCTTACACCAGCGCCTACCGCTATTACAAAGATAATCCTGACACTGAAGAAGTCGAGC AAACCGTATTTGACCGTTTACTGGTGGGCATGGCGAGCACCTATCCCGCGAGCGTCAGTGGTTATGTGACTGACTCAGCC GCCGCGGCAACCGCACTCGCCACTGGGGTAAAATCGTATAATGGGGCGATTTCGGTCGATACCCAAAAGCAACCACTGCC GACCATACTCGAAAAAGCCAAATCCCTTGGCCTCAGCACAGGTGTCGCGGTAACGTCGCAAATCAACCACGCCACACCAG CCGCCTTTTTGGCCCACAACGAGAGCCGTAAAAACTACGACGCTCTGGCACTCAGCTATTTAGAAACCAACGCCGATGTA TTTTTAGGCGGTGGTCAAAAATATTTCCCCCCTGCGCTATTAGAGCAGTTCAAAGCCAAGGGCTATCAACACATCAGCCG TTTTGAGGATCTCGCCAGCATCACCCAACCAAAAGTGTTGGGCCTGTTTGCCGAAGTACAATTGCCTTGGGCGATTGATG AGAAAGATGCAAGAAAACTCAGCACCTTAACTCAAAAGGCACTCAGCTTACTGTCGCAAAATGACCAAGGTTTTGTGTTG TTAGTCGAAGGGAGTCTCATCGACTGGGCGGGCCACAATAACGATATCGCCACTGCCATGGGTGAGATGGATGAATTCTC CAATGCCATTGAAGTGGTTGAGCAATTTGTGCGTGAACATCCAGATACCCTGATGGTGATCACCGCCGACCACAATACCG GTGGCCTATCGATTGGCGTCGATGGCAACTACAGCTGGAACCCTGAAATCCTGCGTAATATCTCGGCCAGCACAGACACT TTGGCCTTAGCCGCCATCACTGGTGAACAATGGCAAGCCGATCTCGCCCGTGGTTTAGGCTTTGAGCTTAGCGAAGAAGA AGTCGCAAAATTAAACGTCGCCAGAATGCAGGGATTAGAAACCATGGCAGTAGCGATTCGCCATCTTATTGATAAACGTA CTGATACAGGTTGGACAACCGACGGCCACACAGGCACAGACGTACAAGTGTTTGCCGCAGGTCCGGCGTCTGAGCTGTTT AACGGCCATCAGGACAATACCGATATCGCCAATAAGATTTTTAGCTTATTGCCAAAACCGAAGAAACCTAAAAGCTAA
Upstream 100 bases:
>100_bases GTGAGGTTTTGACACGGTTGATGGGTAAGTTGATAGGCGATGCCGATCAGATCTGCGGCTACGGTTTTAGTTCAACCTAT TTAGGAAACAAGGCCTCAGT
Downstream 100 bases:
>100_bases GCGTTAATCGATACCGTTCATTAAAGGCAACCGCATAATGCAGTTGCCTTTTTTATTGGGTCTTTTTATTAGGGATTTTA TTAAGTCTTAGCGCAGGGAT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMASTYPASVSGYVTDSA AAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADV FLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKALSLLSQNDQGFVL LVEGSLIDWAGHNNDIATAMGEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYSWNPEILRNISASTDT LALAAITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELF NGHQDNTDIANKIFSLLPKPKKPKS
Sequences:
>Translated_425_residues MLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMASTYPASVSGYVTDSA AAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADV FLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKALSLLSQNDQGFVL LVEGSLIDWAGHNNDIATAMGEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYSWNPEILRNISASTDT LALAAITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELF NGHQDNTDIANKIFSLLPKPKKPKS >Mature_425_residues MLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMASTYPASVSGYVTDSA AAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADV FLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKALSLLSQNDQGFVL LVEGSLIDWAGHNNDIATAMGEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYSWNPEILRNISASTDT LALAAITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELF NGHQDNTDIANKIFSLLPKPKKPKS
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=454, Percent_Identity=29.9559471365639, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI116734717, Length=456, Percent_Identity=28.2894736842105, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI94721246, Length=452, Percent_Identity=28.7610619469027, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI294660770, Length=452, Percent_Identity=28.0973451327434, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI157266292, Length=452, Percent_Identity=28.0973451327434, Blast_Score=109, Evalue=5e-24, Organism=Escherichia coli, GI48994877, Length=328, Percent_Identity=35.6707317073171, Blast_Score=162, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320689, Length=435, Percent_Identity=31.264367816092, Blast_Score=162, Evalue=1e-40, Organism=Drosophila melanogaster, GI21355981, Length=449, Percent_Identity=27.8396436525612, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI24651554, Length=463, Percent_Identity=29.8056155507559, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI19921912, Length=460, Percent_Identity=26.9565217391304, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI85725200, Length=444, Percent_Identity=26.5765765765766, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI85815833, Length=444, Percent_Identity=26.5765765765766, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24657842, Length=449, Percent_Identity=27.3942093541203, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859923, Length=293, Percent_Identity=28.6689419795222, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI21358067, Length=449, Percent_Identity=27.3942093541203, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355151, Length=448, Percent_Identity=25.2232142857143, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24657835, Length=448, Percent_Identity=27.0089285714286, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24657827, Length=445, Percent_Identity=26.0674157303371, Blast_Score=93, Evalue=4e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 45938; Mature: 45938
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRL CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHEECCCCCHHHHHHHHHHHH LVGMASTYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLST HHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCC GVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADVFLGGGQKYFPPALLEQFKAK CEEEECCCCCCCCHHHEECCCCCCCHHHHHHHEEECCCCEEECCCCCCCCHHHHHHHHHH GYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKALSLLSQNDQGFVL HHHHHHHHHHHHHHCCCHHHEEEEEEECCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEE LVEGSLIDWAGHNNDIATAMGEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGV EEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEE DGNYSWNPEILRNISASTDTLALAAITGEQWQADLARGLGFELSEEEVAKLNVARMQGLE CCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHH TMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELFNGHQDNTDIANKIFSLLPKP HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCC KKPKS CCCCC >Mature Secondary Structure MLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRL CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHEECCCCCHHHHHHHHHHHH LVGMASTYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLST HHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCC GVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADVFLGGGQKYFPPALLEQFKAK CEEEECCCCCCCCHHHEECCCCCCCHHHHHHHEEECCCCEEECCCCCCCCHHHHHHHHHH GYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKALSLLSQNDQGFVL HHHHHHHHHHHHHHCCCHHHEEEEEEECCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEE LVEGSLIDWAGHNNDIATAMGEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGV EEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEE DGNYSWNPEILRNISASTDTLALAAITGEQWQADLARGLGFELSEEEVAKLNVARMQGLE CCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHH TMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELFNGHQDNTDIANKIFSLLPKP HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCC KKPKS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]