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The map label for this gene is pqqL [C]

Identifier: 126175626

GI number: 126175626

Start: 4019343

End: 4020761

Strand: Direct

Name: pqqL [C]

Synonym: Sbal_3429

Alternate gene names: 126175626

Gene position: 4019343-4020761 (Clockwise)

Preceding gene: 126175624

Following gene: 126175627

Centisome position: 78.39

GC content: 49.75

Gene sequence:

>1419_bases
ATGAGAACTCACATCGCCTTTTTTATCGCCCTTGCGACCAGTGCTTTTAGCAATTCGCTGCTGGCACAATGCAACGCCGA
GCAGGATGCACAAGCCTTATACGCGCTCGAAGCGAATCTAAAAATCTACACACTCGAAAATGGCTTGACGGTGCGATTAC
TGCCCATGGCTGATAAACAGACAGTCACAATCGCCAGCCAATTTAATTTAGGCGCCCGCAACGAAGCCCAAGGTCAGAGC
GGTTATGCTCATCTGTTTGAGCACATGTTATTTAAGGGCAGCGAAAATGCCCCCGGTGATACCTATGCCCAGCAGCTCAG
TGCCTTAGGTGCACGTTTTAATGCCAGCACACATTTTGACTACACCAATTACTATGTGACGCTGCCAAGCCCAGCATTAG
AACTGGGGCTGTATCTCGAAGCCGACCGCTTTATCCGTCCAAGCCTTAATGCCACTACCGTTAAAAATCAGCAGGAAACC
GTACTGCAGGAAATGGCGCAAACCATAGATAATCAGCCCTATGTCCGCAGCGCGATGGCGTTCTTACTCGACCAAGTGCA
AGGCACGCCCTACGGCCACGGTATTATTGGCAGTCGTGAAGATATCTTGCAAGCCACACCAGAAAGCCTAACCGCCATTC
ACCGCGCTTATTATCGCCCCGATGCAATGCAACTTTCCTTAGTAGGCAAGTTGAGTCCACAAACCCTGCAATGGATTGAG
CAAAATTTTGCGACTTGGCCTAAACCAGCGACGACTGAGCCTAGATTCACTGAGTTGCACATCCAGCCTAAACAAGTGCA
TGCTGAGTTGGTCGATGAGCGCGGACCTTGGCCAGGATTACTGCTCGCTTGGCATACCGTAGGTAAAGATCATCCCGATG
CGGCGGCGATTCAACTGCTCGAAAGCTATTTATTTCAAAATACCGCCAGTGCAATCGCTAAACTCAGCCAGCATAATCCC
GCTCAGATGCTCAGCTATTCCCTGCCCTTTGAGTTAGAAAATCATGGAATAGCCAATATTGTCCTGGTTCCTCGCGCTCG
CACTTCACTGGATGCCCTAGTGCAAAAAGTGCTGGGACTTGTCACACAAACACAGCAAGAGGCTCTGGATGAAACCAGCC
TGTGCGCACTTAAACAAGTGTGGTTAAACCATCGATTACAACAACTCAGTGACACCCAAGCACTAGCCACACTGCTTTCG
GCGACCTCTGCTCAAGATAAAGACAATCCCTTTAGCGCGCAGTGGCAGCGGATCAATGCTGTCTCGGCAGGGGATATACA
AAGAGTCGCAACAAAGTATTTTACTCAAAACTATGTACGGCTCGACCTACTGCCACCTTGGTATATTCGCTGGGGGAAAA
CACTGCTGGAATGGCTGCCTGGTGATATGAGCGACAGTCTAGAGGATGCGGTATTATGA

Upstream 100 bases:

>100_bases
TATCGATACCTGTTGGTGGGTTAATCGTCACTTGGTAACGGCATTCAGCTTCGATGAGTCATTTAACGAATTCAAAAAAT
ATGCTCGGCAGGATGCACTT

Downstream 100 bases:

>100_bases
TGAATCTAACTCCTGTAACTCACGGACGACCTAAACAACTACAAGGCTTAATGTGCTGCGCAGCGGCGTTATTACTGAGC
GCCTGTCAGCAAACGCAAAT

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRTHIAFFIALATSAFSNSLLAQCNAEQDAQALYALEANLKIYTLENGLTVRLLPMADKQTVTIASQFNLGARNEAQGQS
GYAHLFEHMLFKGSENAPGDTYAQQLSALGARFNASTHFDYTNYYVTLPSPALELGLYLEADRFIRPSLNATTVKNQQET
VLQEMAQTIDNQPYVRSAMAFLLDQVQGTPYGHGIIGSREDILQATPESLTAIHRAYYRPDAMQLSLVGKLSPQTLQWIE
QNFATWPKPATTEPRFTELHIQPKQVHAELVDERGPWPGLLLAWHTVGKDHPDAAAIQLLESYLFQNTASAIAKLSQHNP
AQMLSYSLPFELENHGIANIVLVPRARTSLDALVQKVLGLVTQTQQEALDETSLCALKQVWLNHRLQQLSDTQALATLLS
ATSAQDKDNPFSAQWQRINAVSAGDIQRVATKYFTQNYVRLDLLPPWYIRWGKTLLEWLPGDMSDSLEDAVL

Sequences:

>Translated_472_residues
MRTHIAFFIALATSAFSNSLLAQCNAEQDAQALYALEANLKIYTLENGLTVRLLPMADKQTVTIASQFNLGARNEAQGQS
GYAHLFEHMLFKGSENAPGDTYAQQLSALGARFNASTHFDYTNYYVTLPSPALELGLYLEADRFIRPSLNATTVKNQQET
VLQEMAQTIDNQPYVRSAMAFLLDQVQGTPYGHGIIGSREDILQATPESLTAIHRAYYRPDAMQLSLVGKLSPQTLQWIE
QNFATWPKPATTEPRFTELHIQPKQVHAELVDERGPWPGLLLAWHTVGKDHPDAAAIQLLESYLFQNTASAIAKLSQHNP
AQMLSYSLPFELENHGIANIVLVPRARTSLDALVQKVLGLVTQTQQEALDETSLCALKQVWLNHRLQQLSDTQALATLLS
ATSAQDKDNPFSAQWQRINAVSAGDIQRVATKYFTQNYVRLDLLPPWYIRWGKTLLEWLPGDMSDSLEDAVL
>Mature_472_residues
MRTHIAFFIALATSAFSNSLLAQCNAEQDAQALYALEANLKIYTLENGLTVRLLPMADKQTVTIASQFNLGARNEAQGQS
GYAHLFEHMLFKGSENAPGDTYAQQLSALGARFNASTHFDYTNYYVTLPSPALELGLYLEADRFIRPSLNATTVKNQQET
VLQEMAQTIDNQPYVRSAMAFLLDQVQGTPYGHGIIGSREDILQATPESLTAIHRAYYRPDAMQLSLVGKLSPQTLQWIE
QNFATWPKPATTEPRFTELHIQPKQVHAELVDERGPWPGLLLAWHTVGKDHPDAAAIQLLESYLFQNTASAIAKLSQHNP
AQMLSYSLPFELENHGIANIVLVPRARTSLDALVQKVLGLVTQTQQEALDETSLCALKQVWLNHRLQQLSDTQALATLLS
ATSAQDKDNPFSAQWQRINAVSAGDIQRVATKYFTQNYVRLDLLPPWYIRWGKTLLEWLPGDMSDSLEDAVL

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI46593007, Length=269, Percent_Identity=25.2788104089219, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI94538354, Length=425, Percent_Identity=22.8235294117647, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17553678, Length=312, Percent_Identity=23.7179487179487, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71999683, Length=232, Percent_Identity=23.7068965517241, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6323192, Length=212, Percent_Identity=22.6415094339623, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21357875, Length=426, Percent_Identity=23.2394366197183, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24646943, Length=426, Percent_Identity=23.2394366197183, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 52651; Mature: 52651

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHIAFFIALATSAFSNSLLAQCNAEQDAQALYALEANLKIYTLENGLTVRLLPMADKQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCEEEEEECCCCEEEEEECCCCC
TVTIASQFNLGARNEAQGQSGYAHLFEHMLFKGSENAPGDTYAQQLSALGARFNASTHFD
EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
YTNYYVTLPSPALELGLYLEADRFIRPSLNATTVKNQQETVLQEMAQTIDNQPYVRSAMA
ECEEEEECCCCHHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
FLLDQVQGTPYGHGIIGSREDILQATPESLTAIHRAYYRPDAMQLSLVGKLSPQTLQWIE
HHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
QNFATWPKPATTEPRFTELHIQPKQVHAELVDERGPWPGLLLAWHTVGKDHPDAAAIQLL
HHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH
ESYLFQNTASAIAKLSQHNPAQMLSYSLPFELENHGIANIVLVPRARTSLDALVQKVLGL
HHHHHHHHHHHHHHHHCCCHHHHHEECCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
VTQTQQEALDETSLCALKQVWLNHRLQQLSDTQALATLLSATSAQDKDNPFSAQWQRINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
VSAGDIQRVATKYFTQNYVRLDLLPPWYIRWGKTLLEWLPGDMSDSLEDAVL
CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MRTHIAFFIALATSAFSNSLLAQCNAEQDAQALYALEANLKIYTLENGLTVRLLPMADKQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCEEEEEECCCCEEEEEECCCCC
TVTIASQFNLGARNEAQGQSGYAHLFEHMLFKGSENAPGDTYAQQLSALGARFNASTHFD
EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
YTNYYVTLPSPALELGLYLEADRFIRPSLNATTVKNQQETVLQEMAQTIDNQPYVRSAMA
ECEEEEECCCCHHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
FLLDQVQGTPYGHGIIGSREDILQATPESLTAIHRAYYRPDAMQLSLVGKLSPQTLQWIE
HHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH
QNFATWPKPATTEPRFTELHIQPKQVHAELVDERGPWPGLLLAWHTVGKDHPDAAAIQLL
HHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH
ESYLFQNTASAIAKLSQHNPAQMLSYSLPFELENHGIANIVLVPRARTSLDALVQKVLGL
HHHHHHHHHHHHHHHHCCCHHHHHEECCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
VTQTQQEALDETSLCALKQVWLNHRLQQLSDTQALATLLSATSAQDKDNPFSAQWQRINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
VSAGDIQRVATKYFTQNYVRLDLLPPWYIRWGKTLLEWLPGDMSDSLEDAVL
CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]