| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175250
Identifier: 126175250
GI number: 126175250
Start: 3570141
End: 3570722
Strand: Reverse
Name: 126175250
Synonym: Sbal_3048
Alternate gene names: NA
Gene position: 3570722-3570141 (Counterclockwise)
Preceding gene: 126175251
Following gene: 126175249
Centisome position: 69.64
GC content: 45.53
Gene sequence:
>582_bases ATGAAGTCAATGTTAGCTAACTCTCGGCATCTGCCTAAACATCAGGGTTTTATACTCTATAACGCCCTGAGTTTTCAGGC TGTGTGGTGGTCTAGTGTGCTTTGGCTTAACTTGTCACTGCTGCTGACTATACCTTTGTTATTGTTTCACTTTATCCTGT TGTCCTCGTCGGGTAAGGGCCAATATCGTCAAGTGGATTTGCGATTAATGCTCAAGGTTGCCGCCCTAGGGATTGGCATT GACGCTGTGCTGTCGGTTTTAGGCCTGTTCGAGTTTGCAGCCTTCCCTTGGTGGCTTGGCTGTTTATGGCTGCACTTTGG CTTGAGTTTAAATCATAGCTTAGCGTTTATGCGACCCTTACCACTGATATTGCAGGCGTTACTCGGAGGAATATTTGGCA CGTTAAGCTATGTAGCGGGCGCGCAGTTTAATGCGGTGACTTTGCCCTACGGCAATGTCATTTCTGCTGTGGTGTTATTT TTTGTTTGGCTAGTCTTGCTGCCATTTTTAATCCAACTTGCTAATCCCTATGGATTTAATCGAAGCACTAAGGCTCGCTC TTTTACTGTGTTTGGACGTTAA
Upstream 100 bases:
>100_bases GGCAATCCGGTTAGATTAGCCGTTGAGAGTAGTCTGTTTAGGTGCATCCGTTCAAATGAAATTGTCGCTGTAGTTGTAGC AAGATAAAAGTGAGGCAAAG
Downstream 100 bases:
>100_bases TTATCGAAATATAGGAATTGAGTCCGGTTAAGTCATTTTTTAGTCAATAGGTGTTGTAAGACATCATGCAGTCAAAGGGG ATCCTATGTCGTCAGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKSMLANSRHLPKHQGFILYNALSFQAVWWSSVLWLNLSLLLTIPLLLFHFILLSSSGKGQYRQVDLRLMLKVAALGIGI DAVLSVLGLFEFAAFPWWLGCLWLHFGLSLNHSLAFMRPLPLILQALLGGIFGTLSYVAGAQFNAVTLPYGNVISAVVLF FVWLVLLPFLIQLANPYGFNRSTKARSFTVFGR
Sequences:
>Translated_193_residues MKSMLANSRHLPKHQGFILYNALSFQAVWWSSVLWLNLSLLLTIPLLLFHFILLSSSGKGQYRQVDLRLMLKVAALGIGI DAVLSVLGLFEFAAFPWWLGCLWLHFGLSLNHSLAFMRPLPLILQALLGGIFGTLSYVAGAQFNAVTLPYGNVISAVVLF FVWLVLLPFLIQLANPYGFNRSTKARSFTVFGR >Mature_193_residues MKSMLANSRHLPKHQGFILYNALSFQAVWWSSVLWLNLSLLLTIPLLLFHFILLSSSGKGQYRQVDLRLMLKVAALGIGI DAVLSVLGLFEFAAFPWWLGCLWLHFGLSLNHSLAFMRPLPLILQALLGGIFGTLSYVAGAQFNAVTLPYGNVISAVVLF FVWLVLLPFLIQLANPYGFNRSTKARSFTVFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21571; Mature: 21571
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSMLANSRHLPKHQGFILYNALSFQAVWWSSVLWLNLSLLLTIPLLLFHFILLSSSGKG CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QYRQVDLRLMLKVAALGIGIDAVLSVLGLFEFAAFPWWLGCLWLHFGLSLNHSLAFMRPL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH PLILQALLGGIFGTLSYVAGAQFNAVTLPYGNVISAVVLFFVWLVLLPFLIQLANPYGFN HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RSTKARSFTVFGR CCCCCCEEEECCC >Mature Secondary Structure MKSMLANSRHLPKHQGFILYNALSFQAVWWSSVLWLNLSLLLTIPLLLFHFILLSSSGKG CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QYRQVDLRLMLKVAALGIGIDAVLSVLGLFEFAAFPWWLGCLWLHFGLSLNHSLAFMRPL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH PLILQALLGGIFGTLSYVAGAQFNAVTLPYGNVISAVVLFFVWLVLLPFLIQLANPYGFN HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RSTKARSFTVFGR CCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA