| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175249
Identifier: 126175249
GI number: 126175249
Start: 3569441
End: 3570055
Strand: Reverse
Name: 126175249
Synonym: Sbal_3047
Alternate gene names: NA
Gene position: 3570055-3569441 (Counterclockwise)
Preceding gene: 126175250
Following gene: 126175248
Centisome position: 69.63
GC content: 42.93
Gene sequence:
>615_bases ATGTCGTCAGTTCGAAATCGCAGCTCAAATCTTGGTTTTTCATTTTTGAATTCAAGCTGCTTAAGTTTATTGGCGCTCAG TTTATTGACCGCACCTCTAAAAGCATTAGAGGCGAAAACGCCAGATTTTGAAAACATTACTATCGAGCTGAATGATGCCG CCGATGTGACGCAGACTTTTCAGGAAGTAGGGCGCGGAGAAATGGATTGGCTGTGGTTTAGTTTGTATAAGGCGAGACTG ATGACGGTAAATGGCCGTTATCAACAGGGGCAATATCCTCTGCTGCTAGATATTGAATATTATCGAGATATAGAGTCTGA AGATCTGTTAGAAGCGACAAAGGATCAATGGCAGCATCTAGCGTTTGCCGAAAATGATATCCAGCGTTGGTTGAGTTTAT TAACCGCCACTTGGCCCGATGTGAAGCAGGGCGACCATTTAAGTTTTAAGGTTATGGATCAGCAAACAAGCCAGTTTTTC TTTAATCATCAACCACTCGACATTATCCACGATGCTAATTTTGCTGAGGCATTTTTAGCGATTTGGTTATCGAAAGACAC TAGCCGTCCGAGTTTGCGGGCGCAATTACTCGGAGAAAAACCATGCGATTGTTAA
Upstream 100 bases:
>100_bases GTGTTTGGACGTTAATTATCGAAATATAGGAATTGAGTCCGGTTAAGTCATTTTTTAGTCAATAGGTGTTGTAAGACATC ATGCAGTCAAAGGGGATCCT
Downstream 100 bases:
>100_bases CACGACTTATCGGTCGAAAGTTATTGTTAGGCCTAATAATGATAGGGCTGCTATCGAGTTGCTCATCGGTGGAAGTGACG GATTATAAAGATACTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSSVRNRSSNLGFSFLNSSCLSLLALSLLTAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARL MTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDQQTSQFF FNHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC
Sequences:
>Translated_204_residues MSSVRNRSSNLGFSFLNSSCLSLLALSLLTAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARL MTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDQQTSQFF FNHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC >Mature_203_residues SSVRNRSSNLGFSFLNSSCLSLLALSLLTAPLKALEAKTPDFENITIELNDAADVTQTFQEVGRGEMDWLWFSLYKARLM TVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHLAFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDQQTSQFFF NHQPLDIIHDANFAEAFLAIWLSKDTSRPSLRAQLLGEKPCDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23447; Mature: 23315
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVRNRSSNLGFSFLNSSCLSLLALSLLTAPLKALEAKTPDFENITIELNDAADVTQTF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH QEVGRGEMDWLWFSLYKARLMTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHL HHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH AFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDQQTSQFFFNHQPLDIIHDANFAEAFLA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCCCCHHEEECCCHHHHHHH IWLSKDTSRPSLRAQLLGEKPCDC HHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SSVRNRSSNLGFSFLNSSCLSLLALSLLTAPLKALEAKTPDFENITIELNDAADVTQTF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH QEVGRGEMDWLWFSLYKARLMTVNGRYQQGQYPLLLDIEYYRDIESEDLLEATKDQWQHL HHHCCCCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHH AFAENDIQRWLSLLTATWPDVKQGDHLSFKVMDQQTSQFFFNHQPLDIIHDANFAEAFLA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHCCCCCHHEEECCCHHHHHHH IWLSKDTSRPSLRAQLLGEKPCDC HHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]