| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is yceI [C]
Identifier: 126175243
GI number: 126175243
Start: 3564686
End: 3565261
Strand: Reverse
Name: yceI [C]
Synonym: Sbal_3041
Alternate gene names: 126175243
Gene position: 3565261-3564686 (Counterclockwise)
Preceding gene: 126175244
Following gene: 126175240
Centisome position: 69.53
GC content: 46.35
Gene sequence:
>576_bases ATGAAAAAGCAACTGTTAAGCGCACTGATTGGTGCATCTCTATTGGCTCCGATGGCGGCTTCAGCGGCGGACTATGTCAT TGACCGTGAAGGAGCACATGCCTCTATTACTTTCAAAGTGAGTCACTTAGGTTATAGCTATGTCGTTGGTCGCTTTAATG ATTTTAGCGGTGACTTTAGCTATGACGCGGCTAAACCCACTGCGGCTAAAGTGAATGTGAAAGTAAATACGCTTAGTGTG GATTCAAACCACGCCGAGCGTGACAAGCATATTCGTAGCGCCGATTTCCTAAACACGAGTAAGTTTGCGCAAGCGACGTT TACCTCAACCACAGTTGAAGATAAAGGTAATGGCGACTTAGTGATTAACGGCAACTTAACCTTAAATGGTGTCACTAAGC CATTAGCGATCAATGCCCATGCAGTGGGCGAAGGTCAAGATCCTTGGGGTGGCTACCGTGCAGGTTTTACGGGCACAACC ACGTTTGCGATGAAAGATTTCGGTATCAAAATGGATTTAGGCCCAGCATCAAGCCATGTTGAGTTAGATCTTGTGGTTGA AGGCGTGCGTAAGTAA
Upstream 100 bases:
>100_bases GCACTCGTGGTAATCCACGCTGCAGGTGCGTTAAAGCATCACTTTATCGATAAAGACGCAACTTTACTCAAAATGATTAA ATTTAATCGAGGATAATACA
Downstream 100 bases:
>100_bases CGCTCAGTTATTCTTCACGAGATGAATAAACAAAAAGCGCCGAAAGGCGCTTTTTGTAAGCTTTGTCGTTAAGTTAACGA CAAGAATTAATCTTGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKKQLLSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVKVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK
Sequences:
>Translated_191_residues MKKQLLSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVKVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK >Mature_191_residues MKKQLLSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAAKPTAAKVNVKVNTLSV DSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDLVINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTT TFAMKDFGIKMDLGPASSHVELDLVVEGVRK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=191, Percent_Identity=56.020942408377, Blast_Score=225, Evalue=2e-60,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20299; Mature: 20299
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLLSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCCC YDAAKPTAAKVNVKVNTLSVDSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDL CCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCE VINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTTTFAMKDFGIKMDLGPASSHV EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEEEEECCEEEECCCCCCCE ELDLVVEGVRK EEEEEEEECCC >Mature Secondary Structure MKKQLLSALIGASLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCCC YDAAKPTAAKVNVKVNTLSVDSNHAERDKHIRSADFLNTSKFAQATFTSTTVEDKGNGDL CCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCE VINGNLTLNGVTKPLAINAHAVGEGQDPWGGYRAGFTGTTTFAMKDFGIKMDLGPASSHV EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEEEEECCEEEECCCCCCCE ELDLVVEGVRK EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA