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The map label for this gene is tadA [H]

Identifier: 126175184

GI number: 126175184

Start: 3506999

End: 3507526

Strand: Reverse

Name: tadA [H]

Synonym: Sbal_2982

Alternate gene names: 126175184

Gene position: 3507526-3506999 (Counterclockwise)

Preceding gene: 126175185

Following gene: 126175182

Centisome position: 68.41

GC content: 50.76

Gene sequence:

>528_bases
GTGGACCAAACGCAGCAAGATGAACAATCGGAGCAAGACGAGCAATGGATGCAAGTCGCTATGCTGATGGCCGAGAAAGC
TGAAGCCGAGGGTGAAGTACCCGTGGGTGCGGTTTTGGTCAAAGACGGCCAGCAAATTGCAACGGGTTACAATTTATCCA
TTAGCCAACACGATCCTAGCGCCCATGCGGAAATTTTATGTTTGCGGGAAGCGGGGCGTTTGGTCGAAAACTATCGCCTG
TTAGACGCGACTTTATATGTCACGCTTGAACCTTGTGCTATGTGTGCCGGTGCCATGGTGCATAGTCGGATAGCGCGGGT
GGTTTTTGGTGCTCGGGATGAAAAAACCGGTGCAGCGGGTACTGTGGTGAATTTACTGCAACACCCGGCATTTAATCATC
AAGTTGAAGTGACATCGGGTGTATTGGCCGACGCCTGTAGCGCGCAATTGAGTCGTTTTTTTAAACGGCGTAGAGAGGAG
AAAAAAGCCCTGAAACAGGCTCAAAAGGCGCAGCAAGCGATTGAGTAA

Upstream 100 bases:

>100_bases
TTTGATGGATTAACTTAGGCTGAATGACTCAGTCGTGAAATATCTGTGTTTGACTGATATAATCCGGCATTATTTTTTGG
CTAATCGGTAGAGGGTGTGA

Downstream 100 bases:

>100_bases
ACAGCGGTAAAAGCGACAGGATTAATCCTGAGACTGAATAAAAGTAAAGAACAGTTTCTGACGATTCAAAATACGACGAT
GGCGAACTTTAAGTAAAGTA

Product: CMP/dCMP deaminase zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDQTQQDEQSEQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLVENYRL
LDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQVEVTSGVLADACSAQLSRFFKRRREE
KKALKQAQKAQQAIE

Sequences:

>Translated_175_residues
MDQTQQDEQSEQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLVENYRL
LDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQVEVTSGVLADACSAQLSRFFKRRREE
KKALKQAQKAQQAIE
>Mature_175_residues
MDQTQQDEQSEQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLVENYRL
LDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQVEVTSGVLADACSAQLSRFFKRRREE
KKALKQAQKAQQAIE

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=156, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=5e-16,
Organism=Escherichia coli, GI145693172, Length=157, Percent_Identity=61.1464968152866, Blast_Score=213, Evalue=4e-57,
Organism=Escherichia coli, GI1786616, Length=155, Percent_Identity=31.6129032258064, Blast_Score=60, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17541138, Length=155, Percent_Identity=32.258064516129, Blast_Score=86, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17554608, Length=107, Percent_Identity=36.4485981308411, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325319, Length=103, Percent_Identity=38.8349514563107, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322425, Length=172, Percent_Identity=30.2325581395349, Blast_Score=68, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21355527, Length=163, Percent_Identity=31.9018404907975, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 19267; Mature: 19267

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTQQDEQSEQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCEEECCCCCC
AHAEILCLREAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAG
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TVVNLLQHPAFNHQVEVTSGVLADACSAQLSRFFKRRREEKKALKQAQKAQQAIE
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQTQQDEQSEQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCEEECCCCCC
AHAEILCLREAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAG
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TVVNLLQHPAFNHQVEVTSGVLADACSAQLSRFFKRRREEKKALKQAQKAQQAIE
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]