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The map label for this gene is 126174472

Identifier: 126174472

GI number: 126174472

Start: 2609992

End: 2610555

Strand: Direct

Name: 126174472

Synonym: Sbal_2256

Alternate gene names: NA

Gene position: 2609992-2610555 (Clockwise)

Preceding gene: 126174471

Following gene: 126174474

Centisome position: 50.9

GC content: 50.71

Gene sequence:

>564_bases
GTGAGTCTGATATGTGCGGGTTTGTATGTCGCAGGCTTAGCCAGTCCTGCTGTCGACAACCTGCTCGCCTATCGCCGCAG
TGCTATTGCTGATGGTGAATGGTGGCGCTTAATCAGCGGTAATTTATTGCACACGAATCAGTGGCACCTGTTGATGAATC
TTGCGGGTCTGTGGGTTGTGCTGTTTTTGCATCATTTCCACTACCATCTCAAAGGCTTAAGCGCGCTATTCCTTGTGCTA
TGTCTACTCGAAGGCATAGGCTTATATTTGGGCTACCCGCAATTGCTCGGTTATGTCGGCTTAAGCGGTATGTTGCATGG
CTTATTCGCCTTCGGCGCGGTTCAGGATATTGTCCGCAAGCTGCGCTCAGGCTATCTGCTGTTACTTGGCGTTATCATCA
AGGTTGGCCACGAACAGCTTTATGGCGCCAGCAATGATGTCACCGCCATGATAGGCGCGCGCGTGGCAACCGAGGCGCAT
TTGGTCGGTTTAATCTGTGGGCTGATTTGTGCTTTAGCGGTATTCATCAAGCTAAAGTTTCGCCACGTAAAAGTCTCTGC
GTAA

Upstream 100 bases:

>100_bases
GTTTGGATGAGTACATGCAGGATAAAACCGCAGTCATGGCTTCACTCGACGCTAGCGAGCCTAAGGCATGACACGCAGTC
CCTATTGGGTCGCGCTGATA

Downstream 100 bases:

>100_bases
TTCTCTGACAGACATAAAAAAGCCGTCGCAGCATCATTGCTGGACGGCTTTTTTATCTTTAGCGTTAAGGTAAATCTAGG
CCTTGATCAACAAGTCCCGC

Product: rhomboid family protein

Products: NA

Alternate protein names: Rhomboid Protein; Integral Membrane Protein; Rhomboid Family Membrane Protein; Rhomboid-Like Protein; Peptidase; Rhomboid Family Integral Membrane Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSLICAGLYVAGLASPAVDNLLAYRRSAIADGEWWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYHLKGLSALFLVL
CLLEGIGLYLGYPQLLGYVGLSGMLHGLFAFGAVQDIVRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAH
LVGLICGLICALAVFIKLKFRHVKVSA

Sequences:

>Translated_187_residues
MSLICAGLYVAGLASPAVDNLLAYRRSAIADGEWWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYHLKGLSALFLVL
CLLEGIGLYLGYPQLLGYVGLSGMLHGLFAFGAVQDIVRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAH
LVGLICGLICALAVFIKLKFRHVKVSA
>Mature_186_residues
SLICAGLYVAGLASPAVDNLLAYRRSAIADGEWWRLISGNLLHTNQWHLLMNLAGLWVVLFLHHFHYHLKGLSALFLVLC
LLEGIGLYLGYPQLLGYVGLSGMLHGLFAFGAVQDIVRKLRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAHL
VGLICGLICALAVFIKLKFRHVKVSA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20404; Mature: 20273

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLICAGLYVAGLASPAVDNLLAYRRSAIADGEWWRLISGNLLHTNQWHLLMNLAGLWVV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHH
LFLHHFHYHLKGLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLFAFGAVQDIVRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAHLVGLICGLICALAVFIKLKF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHVKVSA
HHEEECC
>Mature Secondary Structure 
SLICAGLYVAGLASPAVDNLLAYRRSAIADGEWWRLISGNLLHTNQWHLLMNLAGLWVV
CHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHH
LFLHHFHYHLKGLSALFLVLCLLEGIGLYLGYPQLLGYVGLSGMLHGLFAFGAVQDIVRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSGYLLLLGVIIKVGHEQLYGASNDVTAMIGARVATEAHLVGLICGLICALAVFIKLKF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHVKVSA
HHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA